Compartment Mechanism-Vectorization [WIP] #989
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# Conflicts: # pynestml/cocos/co_co_parameters_assigned_only_in_parameter_block.py # pynestml/cocos/co_co_vector_variable_in_non_vector_declaration.py # pynestml/codegeneration/latex_expression_printer.py # pynestml/codegeneration/nest_codegenerator.py # pynestml/codegeneration/nest_printer.py # pynestml/codegeneration/nest_reference_converter.py # pynestml/utils/messages.py # pynestml/visitors/ast_builder_visitor.py # tests/cocos_test.py
Add compartmental target to frontend
Also consectutive area -wise processing implemented.
Modifications to main vector loop.
…anent zero output and added error message when passing a parameter to the compartment creation that doesn't exist in the model.
…erEwert_vectorization
…th a unit anymore. Bug fix by removing the consecutive area computation from pre_run_hook.
Merge branch 'LeanderEwert_vectorization' into implicit_euler
…be in the master branch anyway
…vided with a unit anymore." This reverts commit b6cb9d8
Switch integration algorithm to implicit Euler
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Vectorizing the step-function calculations of all instances of a given mechanism-type in all compartments within a neuron.
Work in progress.