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91 Open 238 Closed
91 Open 238 Closed
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Issues list

Applying INT8 quantization, just like in Dorado
#388 opened Apr 14, 2024 by wtrinh8
2
Chunks.npy and Dataset.py not being generated
#385 opened Apr 1, 2024 by Sgreenfield9
2
Training data for R10.4, 4 and 5kHz? enhancement New feature or request
#384 opened Mar 15, 2024 by rainwala
2
bonito WASM
#383 opened Mar 13, 2024 by lpryszcz
Feature request: export the list of reads used to train a model
#382 opened Feb 19, 2024 by andreaswallberg
RNA004 Does not output any CTC data question Further information is requested
#379 opened Feb 5, 2024 by VBHarrisN
@iiSeymour
3
RNA002 model
#378 opened Feb 1, 2024 by shizhuoxing
Short basecalled R9.4.1 reads using both trained and default models in bonito, but not in guppy
#376 opened Dec 20, 2023 by andreaswallberg
how to calibrate CTC-CRF model base qualities?
#375 opened Dec 15, 2023 by lpryszcz
1
how bonito normalize raw signals when save-ctc
#374 opened Dec 11, 2023 by xieyy46
1
Update for remora 3.0.0 trained model?
#373 opened Dec 1, 2023 by Mathias-Boulanger
Running the example from the README.md doesn't work
#372 opened Nov 23, 2023 by mvolar
how to cite bonito in my paper?
#370 opened Nov 14, 2023 by zwshan
1
5mC detection for RNA
#365 opened Oct 26, 2023 by keenhl
bonito basecall model refinement preprocessing memory issues
#361 opened Aug 28, 2023 by CodingKaiser
1
DNA 9.4 model info
#360 opened Aug 21, 2023 by lkwhite
1
question about function prepare_ctc_scores in CTC_CRF class
#359 opened Aug 21, 2023 by Fangwq
How to train my data
#357 opened Aug 1, 2023 by xysgxbns
Train older models
#351 opened Jun 14, 2023 by srrmtt
1
Trace-like output from CTC-CRF models
#350 opened Jun 14, 2023 by lpryszcz
run with cpu mode
#349 opened Jun 12, 2023 by gaoxiangcao
1
bonito export
#346 opened Jun 7, 2023 by fergsc
5
RuntimeError when using --modified device
#345 opened Jun 2, 2023 by drivenbyentropy
Duplex basecalling running time
#339 opened Apr 24, 2023 by dweemx
Mean QScore calculation can be much quicker.
#336 opened Mar 24, 2023 by rhpvorderman
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