FloPy example script & notebook tests #618
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: FloPy example script & notebook tests | |
| on: | |
| schedule: | |
| - cron: '0 8 * * *' # run at 8 AM UTC (12 am PST) | |
| jobs: | |
| examples: | |
| name: Example scripts & notebooks | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ ubuntu-latest, macos-latest, windows-latest ] | |
| python-version: [ 3.8, 3.9, "3.10", "3.11", "3.12" ] | |
| exclude: | |
| # avoid shutil.copytree infinite recursion bug | |
| # https://github.com/python/cpython/pull/17098 | |
| - python-version: '3.8.0' | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| timeout-minutes: 90 | |
| steps: | |
| - name: Checkout repo | |
| uses: actions/checkout@v4 | |
| - name: Setup Micromamba | |
| uses: mamba-org/setup-micromamba@v1 | |
| with: | |
| environment-file: etc/environment.yml | |
| cache-environment: true | |
| cache-downloads: true | |
| create-args: >- | |
| python=${{ matrix.python-version }} | |
| init-shell: >- | |
| bash | |
| powershell | |
| - name: Install FloPy | |
| run: pip install . | |
| - name: OpenGL workaround on Linux | |
| if: runner.os == 'Linux' | |
| run: | | |
| # referenced from https://github.com/pyvista/pyvista/blob/main/.github/workflows/vtk-pre-test.yml#L53 | |
| pip uninstall -y vtk | |
| pip install --extra-index-url https://wheels.vtk.org trame vtk-osmesa | |
| - name: Install OpenGL on Windows | |
| if: runner.os == 'Windows' | |
| shell: pwsh | |
| run: | | |
| Set-StrictMode -Version Latest | |
| $ErrorActionPreference = "Stop" | |
| $PSDefaultParameterValues['*:ErrorAction']='Stop' | |
| powershell .github/install_opengl.ps1 | |
| - name: Install Modflow-related executables | |
| uses: modflowpy/install-modflow-action@v1 | |
| - name: Install Modflow dev build executables | |
| uses: modflowpy/install-modflow-action@v1 | |
| with: | |
| repo: modflow6-nightly-build | |
| - name: Update FloPy packages | |
| run: python -m flopy.mf6.utils.generate_classes --ref develop --no-backup | |
| - name: Run example tests | |
| working-directory: autotest | |
| run: pytest -v -m="example" -n=auto -s --durations=0 --keep-failed=.failed | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| - name: Upload failed test outputs | |
| uses: actions/upload-artifact@v4 | |
| if: failure() | |
| with: | |
| name: failed-example-${{ matrix.os }}-${{ matrix.python-version }} | |
| path: autotest/.failed/** |