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Achievement: Public SponsorAchievement: QuickdrawAchievement: Pull Sharkx2Achievement: YOLO
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Pinned

  1. neherlab/pangraph neherlab/pangraph Public

    A bioinformatic toolkit to align genome assemblies into pangenome graphs

    Julia 76 6

  2. affinity_maturation affinity_maturation Public

    This repository contains the code for the simulations and figures of the paper "Quantitative modeling of the effect of antigen dosage on the distribution of B-cell affinities in maturating germinal…

    Jupyter Notebook 1 1

  3. evo-genome-analysis evo-genome-analysis Public

    workflow for the genomic analysis of evolution experiments

    Python 1

  4. pypangraph pypangraph Public

    Python package to manipulate pangenome graphs generated by PanGraph

    Python 2

  5. genome-assembly genome-assembly Public

    nextflow pipeline for parallel assembly of genomes using trycycler

    Nextflow 2

  6. nanopore-basecalling nanopore-basecalling Public

    Nextflow pipeline to perform live basecalling of nanopore reads on cpu/gpu on a cluster using SLURM.

    Python 1 1