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[wip] Deprecate various parameter related functions from dataset #3960

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This should eventually enable us to cleanup the use of new and old style interdeps

  • Ensure that these are not used internally
  • Update plottr to use non deprecated api
  • Ensure that tests don't trigger warnings

Level 2 is inside decorate_callable e.g. one level up from the warning
Level 3 is the call that actually triggers the warning
e.g. two levels up from the warning
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