Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

atlas init-publicdoesn't work. #535

Closed
SilasK opened this issue Jul 25, 2022 · 2 comments
Closed

atlas init-publicdoesn't work. #535

SilasK opened this issue Jul 25, 2022 · 2 comments

Comments

@SilasK
Copy link
Member

SilasK commented Jul 25, 2022

Unfortunately I based this part on scripts that interact NCBI Trace, which was discontinued in June 2022.

Apparently it is very complicated to get the right data from NCBI.

I try to find another solution based on EBI using pysradb of ffq.

@SilasK SilasK pinned this issue Aug 2, 2022
@luozhy88
Copy link

I have same problem!

@github-actions
Copy link

There was no activity since some time. I hope your issue is solved in the mean time.
This issue will automatically close soon if no further activity occurs.

Thank you for your contributions.

@github-actions github-actions bot added the stale label May 18, 2023
@github-actions github-actions bot added the stale label Jul 22, 2023
@SilasK SilasK removed the stale label Jul 24, 2023
@metagenome-atlas metagenome-atlas deleted a comment from github-actions bot Jul 24, 2023
@SilasK SilasK closed this as completed Jul 28, 2023
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Projects
None yet
Development

No branches or pull requests

2 participants