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metagenome-atlas

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atlas atlas Public

ATLAS - Three commands to start analyzing your metagenome data

Python 346 97
Tutorial Tutorial Public

A tutorial for Metagenome-Atlas

MAXScript 20 13

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Showing 10 of 30 repositories

atlas Public
ATLAS - Three commands to start analyzing your metagenome data

Python 346 BSD-3-Clause 97 5 3 Updated Apr 29, 2024
snakemake-wrappers Public Forked from snakemake/snakemake-wrappers
This is the development home of the Snakemake wrapper repository, see

CAP CDS 0 175 0 1 Updated Jan 15, 2024
Tutorial Public
A tutorial for Metagenome-Atlas

MAXScript 20 GPL-3.0 13 4 2 Updated Nov 24, 2023
genecatalog_atlas Public
Extended genecatalog workflow for metagenome-atlas

Python 1 MIT 0 0 0 Updated Sep 27, 2023
genome-annotator Public

Python 3 MIT 0 1 0 Updated Sep 27, 2023
supp_data_atlas Public
Supplementary data for Atlas manuscript

Jupyter Notebook 0 1 0 0 Updated Sep 27, 2023
plasmid_atlas Public

Python 1 MIT 0 0 0 Updated Sep 27, 2023
kingfisher_workflow Public Forked from trickovicmatija/kingfisher_workflow
This is a workflow that allows you to download whole projects and metadata with kingfisher. Additionally, it takes care about merging same samples together.

Python 0 MIT 1 0 0 Updated Aug 31, 2023
metagenome-assembly Public
Workflow module for metagenome assembly

Python 1 MIT 0 0 0 Updated Aug 31, 2023
snake_gtdbtk Public
A snakemake for GTDB-tk

Python 5 1 0 0 Updated Aug 31, 2023

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