Popular repositories

1. Finite-Element-Simulation-for-a-Nonlinear-PDE-Model Finite-Element-Simulation-for-a-Nonlinear-PDE-Model Public

   Integrated a chemotaxis PDE model using a nonlinear solver in FEniCS and compared to a corresponding Integro-difference equation model.

   1

2. Antibody-Titer-Data-Modeling-and-Assessment Antibody-Titer-Data-Modeling-and-Assessment Public

   This repository contains code for generating synthetic antibody titer data, fitting a simple linear model to it, and assessing whether the model accurately predicts the true parameters used for gen…

3. Fast-Fourier-Transform-Simulation-for-Integro-Difference-Equation-Model Fast-Fourier-Transform-Simulation-for-Integro-Difference-Equation-Model Public

   This project solves an integro-difference equation model with FFT for a diffusion kernel. It integrates four kernels, approximated by Laplace's method, and conducts parameter estimation via Maximum…

   MATLAB

4. Differential-Expression-Analysis Differential-Expression-Analysis Public

   This project applies the DESeq2 model for differential expression analysis, considering two factors: lactation and location, to the provided dataset. The analysis compares normalized counts between…

5. Forward-Finite-Difference-Simulation-of-Keller-Segel-diffusion-model Forward-Finite-Difference-Simulation-of-Keller-Segel-diffusion-model Public

   I implemented a Keller-Segel diffusion model and Forward Finite Difference method in Mathematica to model the effect of hydrogen peroxide preconditioning on stem cell migration. The lab work was su…

   Mathematica