Scripts and code created in Superfine/Bear lab UNC Chapel Hill departments of Biology, Physics and Astronomy, Applied Physical Science and Lineberger Comprehensive Cancer Center
Variety of code and scripts involving automating work flow in studies of cell motilty and traction force microscopy. Includes edits to Danuser TF code provided under GPL, matlab scripts to automate image analysis, FIJI macros to automate image massaging and initial processing. Basic TF post analysis code is provided.
Split into several parts; Area segmentation and automatic cell tracking based off of MATLAB's image processing toolbox (Now in GUI form!), FIJI/matlab macros/scripts specific to our image analysis pipeline, and other misc scripts and code.
A small selection of sample images are included to facilate testing of scripts.
Copyright (C) <2020> <Max Hockenberry>
This program is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License
along with this program. If not, see <https://www.gnu.org/licenses/>.