Discussions

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  Post translational modification

  amiel-ab started May 7, 2024 in Ideas

  

  

  

  

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  Atomtype Q5 not found error -Go model simulation

  Asharuthra started May 24, 2024 in General

  

  

  

  

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  How to get the Martini CG of an AA polymer?

  pranoy-ray asked Mar 11, 2024 in Q&A · Answered

  

  

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  Coarse Grain a basic All-Atom structure of Polystyrene

  pranoy-ray asked Feb 23, 2024 in Q&A · Closed · Answered

  

  

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  DNA-protein sims in MARTINI 3

  agoliaei asked Jan 22, 2024 in Q&A · Answered

  

  

  

  

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  removing interactions (again)

  csbrasnett started Oct 5, 2023 in General · Closed

  

  

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  Adding palmitoyl chains to a protein

  mdoktorova asked Aug 24, 2023 in Q&A · Unanswered

  

  

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  redundant link in martini3001

  data

  fgrunewald started Jun 21, 2023 in General

  

  

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  Error when generate Martini topology and coordinates

  Clare-xiong announced Mar 22, 2023 in Announcements

  

  

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  Suggestion: "Mean field" histidine

  enhancement data feature-request

  KasperBuskPedersen announced Feb 8, 2023 in Announcements

  

  

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  Martini 2.2P generating unstable model

  TobyEdwardKing asked Feb 8, 2023 in Q&A · Unanswered

  

  

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  Amber mapping ignores hydrogen in BB

  fgrunewald announced Jan 30, 2023 in Announcements

  

  

  

  

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  martinize2 AlphaFold benchmark

  Marco447 started Jan 31, 2023 in General

  

  

  

  

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  Martini 3 with Go Model bias

  whitead asked Dec 22, 2022 in Q&A · Unanswered

  

  

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  Selecting terminal links exclusively

  fgrunewald asked Nov 30, 2022 in Q&A · Unanswered

  

  

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  Replace DSSP

  fgrunewald started Nov 18, 2022 in Ideas

  

  

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  Selectively removing interactions from molecule

  csbrasnett started Nov 16, 2022 in General

  

  

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  writing itp after modification

  csbrasnett started Oct 27, 2022 in General

  

  

  

  

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  martinize2: command not found

  mangochiral asked Sep 6, 2022 in Q&A · Answered

  

  

  

  

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  Welcome to vermouth-martinize Discussions!

  fgrunewald announced Sep 7, 2022 in Announcements

  

  

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