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  • HHMI Janelia Research Campus

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Achievement: QuickdrawAchievement: YOLOAchievement: Starstruckx2Achievement: Pull Sharkx2Achievement: Arctic Code Vault Contributor
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Achievement: QuickdrawAchievement: YOLOAchievement: Starstruckx2Achievement: Pull Sharkx2Achievement: Arctic Code Vault Contributor
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Pinned

  1. MouseLand/Kilosort MouseLand/Kilosort Public

    Fast spike sorting with drift correction for up to a thousand channels

    Python 410 220

  2. MouseLand/suite2p MouseLand/suite2p Public

    cell detection in calcium imaging recordings

    Jupyter Notebook 328 234

  3. MouseLand/cellpose MouseLand/cellpose Public

    a generalist algorithm for cellular segmentation with human-in-the-loop capabilities

    Jupyter Notebook 1.2k 349

  4. MouseLand/rastermap MouseLand/rastermap Public

    a visualization method for neural data

    Python 161 41

  5. MouseLand/facemap MouseLand/facemap Public

    Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes singular value decomposition (SVD) of behavioral videos.

    Python 150 57

  6. MouseLand/stringer-et-al-2019 MouseLand/stringer-et-al-2019 Public

    paper figure code

    Python 25 13