CppCheck: use some stl algorithms

Framework/API/src/AlgorithmManager.cpp

@@ -111,17 +111,16 @@ IAlgorithm_sptr AlgorithmManagerImpl::getAlgorithm(AlgorithmID id) const {
  */
 void AlgorithmManagerImpl::removeById(AlgorithmID id) {
   std::lock_guard<std::recursive_mutex> _lock(this->m_managedMutex);
-  auto itend = m_managed_algs.end();
-  for (auto it = m_managed_algs.begin(); it != itend; ++it) {
-    if ((**it).getAlgorithmID() == id) {
-      if (!(*it)->isRunning()) {
-        g_log.debug() << "Removing algorithm " << (*it)->name() << '\n';
-        m_managed_algs.erase(it);
-      } else {
-        g_log.debug() << "Unable to remove algorithm " << (*it)->name() << ". The algorithm is running.\n";
-      }
-      break;
-    }
+  const auto it = std::find_if(m_managed_algs.cbegin(), m_managed_algs.cend(),
+                               [&id](const auto &alg) { return alg->getAlgorithmID() == id; });
+  if (it == m_managed_algs.cend()) {
+    return;
+  }
+  if (!(*it)->isRunning()) {
+    g_log.debug() << "Removing algorithm " << (*it)->name() << '\n';
+    m_managed_algs.erase(it);
+  } else {
+    g_log.debug() << "Unable to remove algorithm " << (*it)->name() << ". The algorithm is running.\n";
   }
 }
 
@@ -174,12 +173,11 @@ size_t AlgorithmManagerImpl::removeFinishedAlgorithms() {
   std::copy_if(m_managed_algs.cbegin(), m_managed_algs.cend(), std::back_inserter(theCompletedInstances),
                [](const auto &algorithm) { return (algorithm->isReadyForGarbageCollection()); });
   for (auto completedAlg : theCompletedInstances) {
-    auto itend = m_managed_algs.end();
-    for (auto it = m_managed_algs.begin(); it != itend; ++it) {
-      if ((**it).getAlgorithmID() == completedAlg->getAlgorithmID()) {
-        m_managed_algs.erase(it);
-        break;
-      }
+    const auto it = std::find_if(m_managed_algs.begin(), m_managed_algs.end(), [&completedAlg](const auto &alg) {
+      return alg->getAlgorithmID() == completedAlg->getAlgorithmID();
+    });
+    if (it != m_managed_algs.end()) {
+      m_managed_algs.erase(it);
     }
   }
   return theCompletedInstances.size();

Framework/API/src/FileProperty.cpp

@@ -287,16 +287,11 @@ bool FileProperty::extsMatchRunFiles() {
   try {
     Kernel::FacilityInfo facilityInfo = Kernel::ConfigService::Instance().getFacility();
     const std::vector<std::string> facilityExts = facilityInfo.extensions();
-    auto facilityExtsBegin = facilityExts.cbegin();
-    auto facilityExtsEnd = facilityExts.cend();
     const std::vector<std::string> allowedExts = this->allowedValues();
+    match = std::any_of(allowedExts.cbegin(), allowedExts.cend(), [&facilityExts](const auto &ext) {
+      return std::find(facilityExts.cbegin(), facilityExts.cend(), ext) != facilityExts.cend();
+    });
 
-    for (const auto &ext : allowedExts) {
-      if (std::find(facilityExtsBegin, facilityExtsEnd, ext) != facilityExtsEnd) {
-        match = true;
-        break;
-      }
-    }
   } catch (Mantid::Kernel::Exception::NotFoundError &) {
   } // facility could not be found, do nothing this will return the default
   // match of false

Framework/API/src/IFunction.cpp

@@ -417,11 +417,10 @@ IConstraint *IFunction::getConstraint(size_t i) const {
  */
 void IFunction::removeConstraint(const std::string &parName) {
   size_t iPar = parameterIndex(parName);
-  for (auto it = m_constraints.begin(); it != m_constraints.end(); ++it) {
-    if (iPar == (**it).getLocalIndex()) {
-      m_constraints.erase(it);
-      break;
-    }
+  const auto it = std::find_if(m_constraints.cbegin(), m_constraints.cend(),
+                               [&iPar](const auto &constraint) { return iPar == constraint->getLocalIndex(); });
+  if (it != m_constraints.cend()) {
+    m_constraints.erase(it);
   }
 }
 
@@ -456,7 +455,7 @@ void IFunction::setUpForFit() {
 std::string IFunction::writeConstraints() const {
   std::ostringstream stream;
   bool first = true;
-  for (auto &constrint : m_constraints) {
+  for (const auto &constrint : m_constraints) {
     if (constrint->isDefault())
       continue;
     if (!first) {
@@ -730,7 +729,7 @@ std::string IFunction::Attribute::asUnquotedString() const {
   if (*(attr.begin()) == '\"')
     unquoted = std::string(attr.begin() + 1, attr.end() - 1);
   if (*(unquoted.end() - 1) == '\"')
-    unquoted = std::string(unquoted.begin(), unquoted.end() - 1);
+    unquoted.resize(unquoted.size() - 1);
 
   return unquoted;
 }
@@ -1674,7 +1673,8 @@ IPropertyManager::getValue<std::shared_ptr<Mantid::API::IFunction>>(const std::s
 template <>
 MANTID_API_DLL std::shared_ptr<const Mantid::API::IFunction>
 IPropertyManager::getValue<std::shared_ptr<const Mantid::API::IFunction>>(const std::string &name) const {
-  auto *prop = dynamic_cast<PropertyWithValue<std::shared_ptr<Mantid::API::IFunction>> *>(getPointerToProperty(name));
+  const auto *prop =
+      dynamic_cast<PropertyWithValue<std::shared_ptr<Mantid::API::IFunction>> *>(getPointerToProperty(name));
   if (prop) {
     return prop->operator()();
   } else {

Framework/Algorithms/inc/MantidAlgorithms/FitPeaks.h

@@ -214,7 +214,7 @@ class MANTID_ALGORITHMS_DLL FitPeaks final : public API::Algorithm {
                                   const std::shared_ptr<FitPeaksAlgorithm::PeakFitResult> &fit_result);
 
   /// calculate peak+background for fitted
-  void calculateFittedPeaks(std::vector<std::shared_ptr<FitPeaksAlgorithm::PeakFitResult>> fit_results);
+  void calculateFittedPeaks(const std::vector<std::shared_ptr<FitPeaksAlgorithm::PeakFitResult>> &fit_results);
 
   /// Get the parameter name for peak height (I or height or etc)
   std::string getPeakHeightParameterName(const API::IPeakFunction_const_sptr &peak_function);

Framework/Algorithms/src/Bin2DPowderDiffraction.cpp

@@ -321,11 +321,12 @@ void Bin2DPowderDiffraction::ReadBinsFromFile(std::vector<double> &Ybins,
  * @param[in] Xbins --- bins to unify. Will be overwritten.
  */
 size_t Bin2DPowderDiffraction::UnifyXBins(std::vector<std::vector<double>> &Xbins) const {
+  if (Xbins.size() == 0)
+    return 0;
   // get maximal vector size
-  size_t max_size = 0;
-  for (const auto &v : Xbins) {
-    max_size = std::max(v.size(), max_size);
-  }
+  size_t maxSize = std::max_element(Xbins.cbegin(), Xbins.cend(), [](const auto &a, const auto &b) {
+                      return a.size() < b.size();
+                    })->size();
   // resize all vectors to maximum size, fill last vector element at the end
   for (auto &v : Xbins) {
     if (v.size() < max_size)

Framework/Algorithms/src/ConjoinWorkspaces.cpp

@@ -116,11 +116,11 @@ void ConjoinWorkspaces::checkForOverlap(const MatrixWorkspace &ws1, const Matrix
       }
     }
     const auto &dets = spec.getDetectorIDs();
-    for (const auto &det : dets) {
-      if (detectors.find(det) != detectors.end()) {
-        g_log.error() << "The input workspaces have common detectors: " << (det) << "\n";
-        throw std::invalid_argument("The input workspaces have common detectors");
-      }
+    const auto it = std::find_if(dets.cbegin(), dets.cend(),
+                                 [&detectors](const auto &det) { return detectors.find(det) != detectors.cend(); });
+    if (it != dets.cend()) {
+      g_log.error() << "The input workspaces have common detectors: " << (*it) << std::endl;
+      throw std::invalid_argument("The input workspaces have common detectors");
     }
   }
 }

Framework/Algorithms/src/ConvertUnits.cpp

@@ -317,9 +317,8 @@ MatrixWorkspace_sptr ConvertUnits::convertQuickly(const API::MatrixWorkspace_con
   const bool commonBoundaries = inputWS->isCommonBins();
   if (commonBoundaries) {
     // Calculate the new (common) X values
-    for (auto &x : outputWS->mutableX(0)) {
-      x = factor * std::pow(x, power);
-    }
+    std::transform(outputWS->mutableX(0).cbegin(), outputWS->mutableX(0).cend(), outputWS->mutableX(0).begin(),
+                   [&](const auto &x) { return factor * std::pow(x, power); });
 
     auto xVals = outputWS->sharedX(0);
 
@@ -345,9 +344,8 @@ MatrixWorkspace_sptr ConvertUnits::convertQuickly(const API::MatrixWorkspace_con
   for (int64_t k = 0; k < numberOfSpectra_i; ++k) {
     PARALLEL_START_INTERRUPT_REGION
     if (!commonBoundaries) {
-      for (auto &x : outputWS->mutableX(k)) {
-        x = factor * std::pow(x, power);
-      }
+      std::transform(outputWS->mutableX(k).cbegin(), outputWS->mutableX(k).cend(), outputWS->mutableX(k).begin(),
+                     [&](const auto &x) { return factor * std::pow(x, power); });
     }
     // Convert the events themselves if necessary.
     if (m_inputEvents) {

Framework/Algorithms/src/FitPeaks.cpp

@@ -496,14 +496,11 @@ std::map<std::string, std::string> FitPeaks::validateInputs() {
       functionParameterNames.emplace_back(m_peakFunction->parameterName(i));
     // check that the supplied names are in the function
     // it is acceptable to be missing parameters
-    bool failed = false;
-    for (const auto &parName : suppliedParameterNames) {
-      if (std::find(functionParameterNames.begin(), functionParameterNames.end(), parName) ==
-          functionParameterNames.end()) {
-        failed = true;
-        break;
-      }
-    }
+    const bool failed = std::any_of(suppliedParameterNames.cbegin(), suppliedParameterNames.cend(),
+                                    [&functionParameterNames](const auto &parName) {
+                                      return std::find(functionParameterNames.begin(), functionParameterNames.end(),
+                                                       parName) == functionParameterNames.end();
+                                    });
     if (failed) {
       std::string msg = "Specified invalid parameter for peak function";
       if (haveCommonPeakParameters)
@@ -1473,7 +1470,7 @@ bool FitPeaks::processSinglePeakFitResult(size_t wsindex, size_t peakindex, cons
  * fitted parameter
  * table
  */
-void FitPeaks::calculateFittedPeaks(std::vector<std::shared_ptr<FitPeaksAlgorithm::PeakFitResult>> fit_results) {
+void FitPeaks::calculateFittedPeaks(const std::vector<std::shared_ptr<FitPeaksAlgorithm::PeakFitResult>> &fit_results) {
   // check
   if (!m_fittedParamTable)
     throw std::runtime_error("No parameters");

Framework/CurveFitting/src/Algorithms/LeBailFunction.cpp

@@ -477,13 +477,9 @@ bool LeBailFunction::calculateGroupPeakIntensities(vector<pair<double, IPowderDi
     peak->function(localpeakvalue, datax);
 
     // check data
-    size_t numbadpts(0);
-    vector<double>::const_iterator localpeakvalue_end = localpeakvalue.end();
-    for (auto it = localpeakvalue.begin(); it != localpeakvalue_end; ++it) {
-      if ((*it != 0.) && (*it < NEG_DBL_MAX || *it > DBL_MAX)) {
-        numbadpts++;
-      }
-    }
+    const auto numbadpts = std::count_if(localpeakvalue.cbegin(), localpeakvalue.cend(), [&](const auto &pt) {
+      return (pt != 0.) && (pt < NEG_DBL_MAX || pt > DBL_MAX);
+    });
 
     // report the problem and/or integrate data
     if (numbadpts == 0) {

Framework/CurveFitting/src/ExcludeRangeFinder.cpp

@@ -66,22 +66,20 @@ void ExcludeRangeFinder::findNextExcludedRange(double p) {
   // m_exclude that is greater than p. If this point is a start than the
   // end will be the following point. If it's an end then the start is
   // the previous point. Keep index m_exclIndex pointing to the start.
-  for (auto it = m_exclude.begin() + m_exclIndex; it != m_exclude.end(); ++it) {
-    if (*it >= p) {
-      m_exclIndex = static_cast<std::size_t>(std::distance(m_exclude.begin(), it));
-      if (m_exclIndex % 2 == 0) {
-        // A number at an even position in m_exclude starts an exclude
-        // range
-        m_startExcludedRange = *it;
-        m_endExcludeRange = *(it + 1);
-      } else {
-        // A number at an odd position in m_exclude ends an exclude range
-        m_startExcludedRange = *(it - 1);
-        m_endExcludeRange = *it;
-        --m_exclIndex;
-      }
-      break;
-    }
+  const auto it = std::find_if(m_exclude.cbegin(), m_exclude.cend(), [&p](const auto &ex) { return ex >= p; });
+  if (it == m_exclude.cend())
+    return;
+  m_exclIndex = static_cast<std::size_t>(std::distance(m_exclude.begin(), it));
+  if (m_exclIndex % 2 == 0) {
+    // A number at an even position in m_exclude starts an exclude
+    // range
+    m_startExcludedRange = *it;
+    m_endExcludeRange = *(it + 1);
+  } else {
+    // A number at an odd position in m_exclude ends an exclude range
+    m_startExcludedRange = *(it - 1);
+    m_endExcludeRange = *it;
+    --m_exclIndex;
   }
   // No need for additional checks as p < m_exclude.back()
   // and m_exclude[m_exclIndex] < p due to conditions at the calls

Framework/CurveFitting/src/Functions/ProcessBackground.cpp

@@ -366,11 +366,10 @@ void ProcessBackground::addRegion() {
   }
 
   // Check
-  for (auto it = vx.begin() + 1; it != vx.end(); ++it) {
-    if (*it <= *it - 1) {
-      g_log.error() << "The vector X with value inserted is not ordered incrementally\n";
-      throw std::runtime_error("Build new vector error!");
-    }
+  const auto it = std::adjacent_find(vx.cbegin(), vx.cend(), std::greater_equal<double>());
+  if (it != vx.cend()) {
+    g_log.error() << "The vector X with value inserted is not ordered incrementally" << std::endl;
+    throw std::runtime_error("Build new vector error!");
   }
 
   // Construct the new Workspace
@@ -504,7 +503,7 @@ void ProcessBackground::selectFromGivenFunction() {
 
   auto bkgdorder = static_cast<int>(parmap.size() - 1); // A0 - A(n) total n+1 parameters
   bkgdfunc->setAttributeValue("n", bkgdorder);
-  for (auto &mit : parmap) {
+  for (const auto &mit : parmap) {
     string parname = mit.first;
     double parvalue = mit.second;
     bkgdfunc->setParameter(parname, parvalue);

Framework/DataHandling/inc/MantidDataHandling/DetermineChunking.h

@@ -59,6 +59,7 @@ class MANTID_DATAHANDLING_DLL DetermineChunking : public API::Algorithm {
   void exec() override;
   std::string setTopEntryName(const std::string &filename);
   FileType getFileType(const std::string &filename);
+  bool filenameHasExtension(const std::string &filename, const std::vector<std::string> &fileExtensions);
 };
 
 } // namespace DataHandling

Framework/DataHandling/inc/MantidDataHandling/LoadHelper.h

@@ -55,8 +55,8 @@ NeXus::NXDouble getDoubleDataset(const NeXus::NXEntry &, const std::string &);
 
 void replaceZeroErrors(const API::MatrixWorkspace_sptr &, double);
 
-void recurseAndAddNexusFieldsToWsRun(NXhandle nxfileID, API::Run &runDetails, std::string &parent_name,
-                                     std::string &parent_class, int level, bool useFullPath);
+void recurseAndAddNexusFieldsToWsRun(NXhandle nxfileID, API::Run &runDetails, const std::string &parent_name,
+                                     const std::string &parent_class, int level, bool useFullPath);
 } // namespace LoadHelper
 } // namespace DataHandling
 } // namespace Mantid

Framework/DataHandling/inc/MantidDataHandling/LoadRawHelper.h

@@ -68,7 +68,7 @@ class MANTID_DATAHANDLING_DLL LoadRawHelper : public API::IFileLoader<Kernel::Fi
   static bool isIncludeMonitors(const std::string &monitorOption);
 
   static void ProcessLoadMonitorOptions(bool &bincludeMonitors, bool &bseparateMonitors, bool &bexcludeMonitors,
-                                        API::Algorithm *const pAlgo);
+                                        const API::Algorithm *pAlgo);
   /// creates monitor workspace
   static void createMonitorWorkspace(DataObjects::Workspace2D_sptr &monws_sptr,
                                      const DataObjects::Workspace2D_sptr &normalws_sptr,