pullgeodata-v1.py Python script to download all GEO datasets from NCBI-GEO website. Script will also print the time taken to download all datasets. qpubchem.py Python script to fetch compound information from PubChem through API. It contains functions listed below:
- def qpubchem(l): Function returns dictionary of information of compound-id, l. The Dictionary contains IUPAC NAME, SMILES (Isomeric Smiles) InChI Key
- def chemquery(lst): Function returns list of dictionaries ( containing IUPAC, SMILES, InChI) for given input of compound ids.