Skip to content
View maduprey's full-sized avatar
2 followers · 8 following

Achievements

Achievement: Pull Shark
BetaSend feedback

Achievements

Achievement: Pull Shark
BetaSend feedback
Block or Report

Block or report maduprey

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Please don't include any personal information such as legal names or email addresses. Maximum 100 characters, markdown supported. This note will be visible to only you.
Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse
maduprey/README.md

I’m a research data scientist at RTI, modeling communicable and noncommunicable disease, and graduate student in the Applied and Computational Mathematics program at Johns Hopkins. My research interests lie at the intersection of mathematics, computational methods, and biological systems.

Pinned

  1. conftopo conftopo Public

    Explore topological changes across protein conformational changes

    Python 1

  2. delayexplore delayexplore Public

    Interactively view delay embeddings in R^3

    R

  3. dynamic-time-warping dynamic-time-warping Public

    Dynamic time warping and calculation of optimal warp path

    R

  4. protein-conformation-topology protein-conformation-topology Public

    Persistent homology across protein conformational changes

    Jupyter Notebook 1 1

  5. protein-structure-learning protein-structure-learning Public

    Protein classification with deep learning and boosted trees using topological features

    Jupyter Notebook 1