Popular repositories

1. gene_lists gene_lists Public

   List of gene lists for genomic analyses.

   Python 214 82

2. clinvar clinvar Public

   This repo provides tools to convert ClinVar data into a tab-delimited flat file, and also provides that resulting tab-delimited flat file.

   Python 120 55

3. igv_utils igv_utils Public

   utilities for working with IGV: opening files remotely in either desktop IGV or a web viewer (igv.js), creating screenshots, etc.

   JavaScript 47 11

4. gnomad_browser gnomad_browser Public archive

   gnomAD browser pre-ASHG 2018

   JavaScript 33 16

5. tx_annotation tx_annotation Public

   Code associated with 2019 manuscript entitled "Transcript expression-aware annotation improves rare variant discovery and interpretation"

   Python 33 8

6. exac_2015 exac_2015 Public

   Companion repo for ExAC paper, 2015

   R 31 13