Name		Name	Last commit message	Last commit date
Latest commit History 5 Commits
ABM_flow_migrate_main.py		ABM_flow_migrate_main.py
Bifurcation.py		Bifurcation.py
DGraph.py		DGraph.py
ECell.py		ECell.py
Flow.py		Flow.py
Geom.py		Geom.py
Graph.py		Graph.py
Input.py		Input.py
LICENSE		LICENSE
LTETools.py		LTETools.py
Network.py		Network.py
Output.py		Output.py
POE.py		POE.py
README.md		README.md
Vessel.py		Vessel.py
count_flow_events.m		count_flow_events.m
find_angle2D.m		find_angle2D.m
flow_events_4cells.mat		flow_events_4cells.mat
flow_events_6cells.mat		flow_events_6cells.mat
generate_ideal_cap_bed.m		generate_ideal_cap_bed.m
ideal_cap_bed.mat		ideal_cap_bed.mat
ideal_cap_bed_1x1.mat		ideal_cap_bed_1x1.mat
ideal_cap_bed_3x2.mat		ideal_cap_bed_3x2.mat
ideal_cap_bed_3x3.mat		ideal_cap_bed_3x3.mat
ideal_cap_bed_3x3_flow_paths.mat		ideal_cap_bed_3x3_flow_paths.mat
look_for_AVM.m		look_for_AVM.m
look_for_overlap.m		look_for_overlap.m
plot_ABM_output_A_branch.m		plot_ABM_output_A_branch.m
plot_ABM_output_A_branch_3D_polarity.m		plot_ABM_output_A_branch_3D_polarity.m
plot_ABM_output_A_branch_3D_velocity.m		plot_ABM_output_A_branch_3D_velocity.m
plot_ABM_output_A_branch_manual.m		plot_ABM_output_A_branch_manual.m
plot_ABM_output_PD_curve.m		plot_ABM_output_PD_curve.m
plot_ABM_output_demo_vess.m		plot_ABM_output_demo_vess.m
plot_ABM_output_ideal_cap_bed_3D_WSS.m		plot_ABM_output_ideal_cap_bed_3D_WSS.m
plot_ABM_output_ideal_cap_bed_3D_cell_traj.m		plot_ABM_output_ideal_cap_bed_3D_cell_traj.m
plot_ABM_output_ideal_cap_bed_3D_diameter.m		plot_ABM_output_ideal_cap_bed_3D_diameter.m
plot_ABM_output_ideal_cap_bed_3D_flow.m		plot_ABM_output_ideal_cap_bed_3D_flow.m
plot_ABM_output_ideal_cap_bed_3D_flow_with_polarity.m		plot_ABM_output_ideal_cap_bed_3D_flow_with_polarity.m
plot_ABM_output_ideal_cap_bed_3D_flow_with_polarity_zoom.m		plot_ABM_output_ideal_cap_bed_3D_flow_with_polarity_zoom.m
plot_ABM_output_ideal_cap_bed_3D_polarity.m		plot_ABM_output_ideal_cap_bed_3D_polarity.m
plot_ABM_output_ideal_cap_bed_3D_pressure.m		plot_ABM_output_ideal_cap_bed_3D_pressure.m
plot_ABM_output_ideal_cap_bed_3D_velocity.m		plot_ABM_output_ideal_cap_bed_3D_velocity.m
plot_ABM_output_ideal_cap_bed_cell_traj_hist.m		plot_ABM_output_ideal_cap_bed_cell_traj_hist.m
plot_ABM_output_ideal_cap_bed_diameter_hist.m		plot_ABM_output_ideal_cap_bed_diameter_hist.m
plot_ABM_output_ideal_cap_bed_velocity_hist.m		plot_ABM_output_ideal_cap_bed_velocity_hist.m
plot_ellipse_on_cylinder.m		plot_ellipse_on_cylinder.m
plot_ellipse_on_cylinder_color.m		plot_ellipse_on_cylinder_color.m
plot_flow_events_4cells.m		plot_flow_events_4cells.m
plot_flow_events_6cells.m		plot_flow_events_6cells.m
plot_flow_paths.m		plot_flow_paths.m
random_seed_numbers.py		random_seed_numbers.py
track_disappearing_cells.m		track_disappearing_cells.m

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ABM_flow_migrate_angio_v2_overlapping_ellipses_release

An agent-based model of angiogenic remodeling based on force transmission between overlapping ellipses

Lowell Taylor Edgar, Usher Institute, University of Edinburgh

2021

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ltedgar-ed/ABM_flow_migrate_angio_v2_overlapping_ellipses_release

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ABM_flow_migrate_angio_v2_overlapping_ellipses_release

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