An R shiny based tool used for single cell RNA-seq data visualization and analysis.
For more details and basic usage see following tutorials:
User manual for scDVA
A running demo of scDVA is on scDVA
Please contact us:
Ziyi Li: liziyie@pku.edu.cn
Zemin Zhang: zemin@pku.edu.cn
After you run the app.R, the page will look like this:
You can explore the gene expression and metadata information with tSNE(UMAP) plot, box plot, violin plot, bar plot or heatmap. You can also do in-silico FACS and calculate the differentially expressed genes in different groups.
©2019 Ziyi Li. Zhang Lab. All rights reserved.