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data

data

 
 

Demo.m

Demo.m

 
 

LICENSE

LICENSE

 
 

README.md

README.md

 
 

bwlabel3d_anisotropic_resolution.m

bwlabel3d_anisotropic_resolution.m

 
 

figures.zip

figures.zip

 
 

get_convexity.m

get_convexity.m

 
 

get_shape_descriptor.m

get_shape_descriptor.m

 
 

return3dStrel.m

return3dStrel.m

 
 

rodent_brain_polar_descriptor.mat

rodent_brain_polar_descriptor.mat

 
 

sherm.m

sherm.m

 
 

sherm_parallel_2d.m

sherm_parallel_2d.m

 
 

sherm_parallel_3d.m

sherm_parallel_3d.m

 
 

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Implementation of algorithm in 'Yikang Liu et al. (2020) Automatic Brain Extraction for Rodent MRI Images. Neuroinformatics. doi: 10.1007/s12021-020-09453-z''

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image-segmentation shape-descriptor medical-image-processing neuroimaging-analysis

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