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Pinned

  1. iqbal-lab-org/pandora iqbal-lab-org/pandora Public

    Pan-genome inference and genotyping with long noisy or short accurate reads

    C++ 104 14

  2. iqbal-lab-org/make_prg iqbal-lab-org/make_prg Public

    Code to create a PRG from a Multiple Sequence Alignment file

    Python 21 6

  3. karel-brinda/Phylign karel-brinda/Phylign Public

    Alignment against all pre-2019 bacteria on laptops within a few hours (former MOF-Search)

    Python 20 4

  4. iqbal-lab-org/cobs iqbal-lab-org/cobs Public

    Forked from bingmann/cobs

    COBS - Compact Bit-Sliced Signature Index (for Genomic k-Mer Data or q-Grams)

    C++ 13 1

  5. dbgwas dbgwas Public

    Github (trivial) mirror for https://gitlab.com/leoisl/dbgwas

    1

  6. plasnet plasnet Public

    Clustering, visualising and exploring plasmid networks

    JavaScript 1