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@kusterlab

Kuster Lab

The Kuster Lab comprises an international research team with a focus on proteomics, chemical biology and biomarker discovery

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  1. prosit prosit Public archive

    Prosit offers high quality MS2 predicted spectra for any organism and protease as well as iRT prediction. When using Prosit is helpful for your research, please cite "Gessulat, Schmidt et al. 2019"…

    Python 82 48

  2. SIMSI-Transfer SIMSI-Transfer Public

    Similarity-based Isobaric MS2 Identification Transfer

    Python 2 3

Repositories

Showing 10 of 23 repositories
  • curve_curator Public

    Analysis platform for large-scale dose-dependent data

    Python 13 Apache-2.0 3 1 0 Updated May 26, 2024
  • picked_group_fdr Public

    Scalable, accurate and sensitive protein group FDRs for large-scale mass spectrometry experiments

    Jupyter Notebook 10 Apache-2.0 5 5 0 Updated May 22, 2024
  • psite_annotation Public

    Python module for annotating a pandas dataframe with phosphosites, e.g. PhosphoSitePlus annotations, kinase-substrate relations, domain information, etc.

    Python 3 Apache-2.0 0 0 0 Updated May 21, 2024
  • biowc-pathwaygraph Public

    Interactive Visualization of Signaling Pathways

    TypeScript 1 Apache-2.0 0 0 0 Updated May 7, 2024
  • SIMSI-Transfer Public

    Similarity-based Isobaric MS2 Identification Transfer

    Python 2 Apache-2.0 3 7 0 Updated Apr 5, 2024
  • Gem_synergy Public

    Code to analyze and plot data from S. Hoefer et al. 2024.

    R 0 Apache-2.0 0 0 0 Updated Mar 18, 2024
  • decryptM Public
    Python 6 MIT 1 0 0 Updated Sep 7, 2023
  • prosit Public archive

    Prosit offers high quality MS2 predicted spectra for any organism and protease as well as iRT prediction. When using Prosit is helpful for your research, please cite "Gessulat, Schmidt et al. 2019" DOI 10.1038/s41592-019-0426-7

    Python 82 Apache-2.0 48 23 1 Updated Aug 17, 2023
  • pathway-importer Public

    Download and Convert Pathways from KEGG and WikiPathways

    Python 1 Apache-2.0 0 0 0 Updated Aug 14, 2023
  • IPSA_helper Public
    JavaScript 2 0 3 4 Updated Mar 3, 2023
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