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Achievement: Pull Sharkx2Achievement: QuickdrawAchievement: Arctic Code Vault Contributor
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  1. CRBHits CRBHits Public

    [CRBHits](https://github.com/kullrich/CRBHits) is a reimplementation of the Conditional Reciprocal Best Hit algorithm [crb-blast](https://github.com/cboursnell/crb-blast) in R.

    HTML 1

  2. MSA2dist MSA2dist Public

    MSA2dist calculates pairwise distances between all sequences of a DNAStringSet or a AAStringSet using a custom score matrix and conducts codon based analysis

    C++ 4

  3. scTEI scTEI Public

    add any phylogenetically based transcriptome evolutionary index (TEI) to single-cell data objects

    HTML 2

  4. oggmap oggmap Public

    oggmap is a python package to extract orthologous maps (short: orthomap or in other words the evolutionary age of a given orthologous group) from OrthoFinder/eggNOG results. Oggmap results (gene ag…

    Python 3

  5. korthoR korthoR Public

    korthoR calculates pairwise kmer jaccard distance between all sequences of an AAStringSet

    HTML