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Shiny Complex App framework with OmicSelector for all purposes

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OmicApp

Docker

To do.

Running application

GPU:

docker run -d --name testapp --gpus all --restart always -p 23424:80 -v /home/konrad/temp/testapp/:/home/app/ kstawiski/omicapp

CPU:

docker run -d --name testapp --restart always -p 23424:80 -v /home/konrad/temp/testapp/:/home/app/ kstawiski/omicapp-cpu
  • /home/konrad/temp/testapp/ - local directory where data is kept (persistance)
  • 23424 - forwarded host port to the application
  • testapp - name of the docker container

The default login credentials to /developer section is - user: app, password: OmicSelector. For production env remember to secure it by chaing the password: (change NEW_PASSWORD to your new strong one)

docker exec testapp bash -c "echo 'app:NEW_PASSWORD' | chpasswd"