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countimp: Multiple Imputation of incomplete count data

Further information

https://kleinke.io/#software

User's Guide

https://countimp.kleinke.io

Installation

The latest version can be installed from GitHub using function install_github from package remotes:

# install.packages('remotes')
remotes::install_github('kkleinke/countimp')

Main functions

Function Name model / family
mice.impute.poisson() Poisson
mice.impute.quasipoisson() Quasi-Poisson
mice.impute.nb() negative binomial
mice.impute.zip() zero-inflated Poisson
mice.impute.zinb() zero-inflated negative binomial
mice.impute.hp() hurdle Poisson
mice.impute.hnb() hurdle negative binomial
mice.impute.2l.poisson() two-level Poisson
mice.impute.2l.nb() two-level negative binomial
mice.impute.2l.zip() two-level zero-inflated Poisson
mice.impute.2l.zinb() two-level zero-inflated NB
mice.impute.2l.hp() two-level hurdle Poisson
mice.impute.2l.hnb() two-level hurdle negative binomial

References

Kleinke, K., & Reinecke, J. (2013a). Multiple imputation of incomplete zero-inflated count data. Statistica Neerlandica, 67(3), 311–336. doi: 10.1111/stan.12009 http://onlinelibrary.wiley.com/doi/10.1111/stan.12009/abstract

Kleinke, K., & Reinecke, J. (2015a). Multiple imputation of multilevel count data. In U. Engel, B. Jann, P. Lynn, A. Scherpenzeel, and P. Sturgis (Eds.), Improving Survey Methods: Lessons from Recent Research (pp. 381–396). New York: Routledge, Taylor & Francis Group. http://www.psypress.com/books/details/9780415817622/

Kleinke, K., & Reinecke, J. (2015b). Multiple imputation of overdispersed multilevel count data. In: Uwe Engel (Ed.), Survey Measurements. Techniques, Data Quality and Sources of Error (pp. 209–226). Frankfurt a. M.: Campus/The University of Chicago Press. http://press.uchicago.edu/ucp/books/book/distributed/S/bo22196267.html

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