version and doc updated 0.4.6

kassambara · Sep 4, 2019 · ea91fcf · ea91fcf
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diff --git a/DESCRIPTION b/DESCRIPTION
@@ -1,8 +1,8 @@
 Package: survminer
 Type: Package
 Title: Drawing Survival Curves using 'ggplot2'
-Version: 0.4.5.999
-Date: 2019-08-03
+Version: 0.4.6
+Date: 2019-09-03
 Authors@R: c(
     person("Alboukadel", "Kassambara", role = c("aut", "cre"), email = "alboukadel.kassambara@gmail.com"),
     person("Marcin", "Kosinski", role = c("aut"), email = "m.p.kosinski@@gmail.com"),

diff --git a/NEWS.md b/NEWS.md
@@ -1,10 +1,9 @@
-# Survminer 0.4.5.999
+# Survminer 0.4.6
 
 ## New features
 
 - A new function `surv_adjustedcurves` is extracted from `ggadjustedcurves`. This function calculates adjusted survival curves but do not plot them. Its results may be useful for calculation of median survival or some other statistics. ([@pbiecek, #423](https://github.com/kassambara/survminer/pull/423)). 
 
-
      
 ## Minor changes 
 

diff --git a/R/ggcompetingrisks.R b/R/ggcompetingrisks.R
@@ -16,6 +16,7 @@
 #' @author Przemyslaw Biecek, \email{przemyslaw.biecek@@gmail.com}
 #'
 #' @examples
+#' \dontrun{
 #' if(require("cmprsk")){
 #'
 #' set.seed(2)
@@ -39,7 +40,7 @@
 #' fit3 <- survfit(Surv(time, status, type="mstate") ~ group, data=df)
 #' ggcompetingrisks(fit3)
 #' }
-#' \dontrun{
+#'
 #'   library(ggsci)
 #'   library(cowplot)
 #'   ggcompetingrisks(fit3) + theme_cowplot() + scale_fill_jco()

diff --git a/README.Rmd b/README.Rmd
@@ -19,7 +19,7 @@ knitr::opts_chunk$set(
 [![Build Status](https://api.travis-ci.org/kassambara/survminer.png)](https://travis-ci.org/kassambara/survminer)
 [![CRAN_Status_Badge](https://www.r-pkg.org/badges/version/survminer)](https://cran.r-project.org/package=survminer)
 [![Downloads](https://cranlogs.r-pkg.org/badges/survminer)](https://cran.r-project.org/package=survminer)
-[![Total Downloads](https://cranlogs.r-pkg.org/badges/grand-total/survminer?color=orange)](https://cranlogs.r-pkg.org/badges/grand-total/survminer)
+[![Total Downloads](https://cranlogs.r-pkg.org/badges/grand-total/survminer?color=orange)](https://cran.r-project.org/package=survminer)
 
       
       

diff --git a/README.md b/README.md
@@ -1,4 +1,4 @@
-[![Build Status](https://api.travis-ci.org/kassambara/survminer.png)](https://travis-ci.org/kassambara/survminer) [![CRAN\_Status\_Badge](https://www.r-pkg.org/badges/version/survminer)](https://cran.r-project.org/package=survminer) [![Downloads](https://cranlogs.r-pkg.org/badges/survminer)](https://cran.r-project.org/package=survminer) [![Total Downloads](https://cranlogs.r-pkg.org/badges/grand-total/survminer?color=orange)](https://cranlogs.r-pkg.org/badges/grand-total/survminer)
+[![Build Status](https://api.travis-ci.org/kassambara/survminer.png)](https://travis-ci.org/kassambara/survminer) [![CRAN\_Status\_Badge](https://www.r-pkg.org/badges/version/survminer)](https://cran.r-project.org/package=survminer) [![Downloads](https://cranlogs.r-pkg.org/badges/survminer)](https://cran.r-project.org/package=survminer) [![Total Downloads](https://cranlogs.r-pkg.org/badges/grand-total/survminer?color=orange)](https://cran.r-project.org/package=survminer)
 
 <br/>
 
@@ -58,7 +58,7 @@ The main functions, in the package, are organized in different categories as fol
 
 -   **ggforest**(): Draws forest plot for CoxPH model.
 
--   **ggadjustedcurves**(): Plots adjusted survival curves for coxph model.
+-   **ggcoxadjustedcurves**(): Plots adjusted survival curves for coxph model.
 
 <br/>
 

diff --git a/cran-comments.md b/cran-comments.md
@@ -23,8 +23,4 @@ All packages that I could install passed.
 
 ## Update
 
-This is an update version 0.4.5
-
-## Resubmission
-
-Invalid URL removed
+This is an update version 0.4.6
diff --git a/docs/ISSUE_TEMPLATE.html b/docs/ISSUE_TEMPLATE.html
diff --git a/docs/articles/Informative_Survival_Plots.html b/docs/articles/Informative_Survival_Plots.html
diff --git a/docs/articles/Playing_with_fonts_and_texts.html b/docs/articles/Playing_with_fonts_and_texts.html
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diff --git a/docs/articles/Specifiying_weights_in_log-rank_comparisons.html b/docs/articles/Specifiying_weights_in_log-rank_comparisons.html
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diff --git a/docs/authors.html b/docs/authors.html
diff --git a/docs/index.html b/docs/index.html