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  1. wasserstein_inference wasserstein_inference Public

    Code for the project "Parameter estimation for biochemical reaction networks using Wasserstein distances"

    Python 4 2

  2. SciML/FiniteStateProjection.jl SciML/FiniteStateProjection.jl Public

    Finite State Projection algorithms for chemical reaction networks

    Julia 18 7

  3. synmod synmod Public

    Code for the paper "Inference and uncertainty quantification for stochastic gene expression via synthetic models"

    Julia 1

  4. MixtureModels.jl MixtureModels.jl Public

    Expectation-Maximisation algorithms to fit mixture distributions in Julia.

    Julia 1

  5. stan_rnaseq stan_rnaseq Public

    Bayesian mechanistic modelling of scRNAseq data using Stan

    Stan