Pinned

1. FluentDNA FluentDNA Public

   FluentDNA allows you to browse sequence data of any size using a zooming visualization similar to Google Maps. You can use FluentDNA as a standalone program or as a python module for your own bioin…

   JavaScript 63 7

2. skittle skittle Public

   DNASkittle is a web based genome browser that provides an interactive visualization of the raw sequence. Every nucleotide of 10Kbp can fit on one screen at a time. It makes heavy use of signal proc…

   Python 7 4

3. DesktopSkittle DesktopSkittle Public

   The older version of DNASkittle designed with QT in C++ for Desktop computers.

   C++ 3

4. DNASkittleUtils DNASkittleUtils Public

   Fasta file handling utility functions that have been useful to me along the way.

   Python

5. khmer khmer Public

   Forked from dib-lab/khmer

   In-memory nucleotide sequence k-mer counting, filtering, graph traversal and more

   Python

6. qmul-genome-convergence-pipeline qmul-genome-convergence-pipeline Public

   Forked from lonelyjoeparker/qmul-genome-convergence-pipeline

   API and binaries for phylogenomic analyses, particularly comparison of input trees/alignments (CONTEXT) and detecting genomic convergence

   HTML