Statistical forecasting models for Yellow Fever occurrence and incidence in Brazil.
Files included:
Anonymized municipality-week data used in modeling spanning from 2000-2005.
Anonymized municipality-week data used in modeling spanning from 2006-2011.
Anonymized municipality-week data used in modeling spanning from 2012-2018. The three .Rdata files combined comprise the full data set used in analyses.
Produces specified lag periods for model fitting
Computes area under the ROC curve and mean absolute error for evaluating forecating abilities of the binomial and Gamma steps, respectively, of a Gamma hurdle model
Fits models using minimum temperature, humidity, and precipitation at various lag periods during the endemic time period
Fits models using maximum temperature, humidity, and precipitation at various lag periods during the endemmic time period
Fits models using mean temperature, humidity, and precipitation at various lag periods during the endemic time period
Fits models using range of temperature, humidity, and precipitation at various lag periods during the endemic time period
Fits models using minimum temperature, humidity, and precipitation at various lag periods during the epidemic time period
Fits models using maximum temperature, humidity, and precipitation at various lag periods during the epidemic time period
Fits models using mean temperature, humidity, and precipitation at various lag periods during the epidemic time period
Fits models using range of temperature, humidity, and precipitation at various lag periods during the epidemic time period