⭐ = Favorite / Recommendation
- Package Development ⭐⭐
- Webservices ⭐⭐
- Finance
- Mapping Tools ⭐
- High Performance Computing
- Taxonomy
- Databases ⭐
- Model Deployment
- Reproducible Research ⭐
- Anamaly Detection
- Security
- Time-Series
- Optimization ⭐
- Graphics
- Numerical Math
- Open Data ⭐
- Hydrology
- Computational environments ⭐⭐
Additionally, I included the ctv R package.
There is also an exploratory Shiny App that van be viewed at https://jimbrigapps.shinyapps.io/task-views-app/
Quickly browse packages and their licenses using a snapshot of task views retrieved on 2020-02-28.
Not all packages available on CRAN are shown here, just the ones in CRAN’s Task Views.
Repo’s are added via git
submodules; see
the .gitmodules file for details.
git init
git submodule add git@github.com:ropensci/PackageDevelopment.git package-development
git submodule add git@github.com:ropensci/webservices.git
git submodule add git@github.com:eddelbuettel/ctv-finance.git finance
git submodule add git@github.com:ropensci/maptools.git
git submodule add git@github.com:eddelbuettel/ctv-hpc.git "high-performace-computing"
git submodule add git@github.com:ropensci/taxonomy.git
git submodule add git@github.com:terrytangyuan/ctv-databases.git "databases"
git submodule add git@github.com:terrytangyuan/ctv-model-deployment.git "model-deployments"
git submodule add git@github.com:jdblischak/reproducible-research-ctv.git "reproducible-research"
git submodule add git@github.com:pridiltal/ctv-AnomalyDetection.git "anamoly-detection"
git submodule add git@github.com:hrbrmstr/ctvsecurity.git "security"
git submodule add git@github.com:robjhyndman/ctv-TimeSeries.git "timeseries"
git submodule add git@github.com:hwborchers/ctv-optimization.git "optimization"
git submodule add git@github.com:sctyner/ctv-graphics.git "graphics"
git submodule add git@github.com:cran/ctv.git
git submodule add git@github.com:hwborchers/ctv-numericalmath.git "numerical-math"
git submodule add git@github.com:ropensci/opendata.git opendata
git submodule add git@github.com:ropensci/Hydrology.git hydrology
git submodule add git@github.com:o2r-project/ctv-computational-environments.git computational-environments
git submodule add git@github.com:r-spatial/task_views.git "spacial-and-temporal-spatial"
exitIn order to stay up-to-date utilize the update_submods.sh shell
script:
#!/bin/sh
git submodule update --recursiveThe remaining task views are taken from CRAN and placed into the data folder.
- NOTE: I use pandoc to convert between HTML and Markdown here.
remaining <- c(
"Distributions",
"Bayesian",
"Econometrics",
"Environmetrics",
"ExperimentalDesign",
"ExtremeValue",
"FunctionalData",
"MachineLearning",
"MetaAnalysis",
"Multivariate",
"NaturalLanguageProcessing",
"OfficialStatistics",
"Robust",
"SocialSciences",
"Spatial",
"SpatioTemporal",
"Survival",
"WebTechnologies"
)
ctvs <- purrr::map(remaining, function(x) {
read.ctv(system.file("ctv", paste0(x, ".ctv"), package = "ctv"))
}) %>% setNames(remaining)
purrr::walk2(
ctvs,
names(ctvs),
~ctv::ctv2html(x = .x, file = fs::path("data/html", paste0(.y, ".html")))
)
fs::dir_create("data/md")
purrr::walk(basename(fs::dir_ls("data/html")), function(x) {
cmd <- paste0("pandoc -o 'data/md/", fs::path_ext_remove(x), ".md' ", x)
cmd
system(cmd)
})sessioninfo::session_info()- Session info ---------------------------------------------------------------
setting value
version R version 4.0.3 (2020-10-10)
os Windows 10 x64
system x86_64, mingw32
ui RTerm
language en-US
collate English_United States.1252
ctype English_United States.1252
tz America/New_York
date 2021-02-23
- Packages -------------------------------------------------------------------
package * version date lib source
assertthat 0.2.1 2019-03-21 [1] CRAN (R 4.1.0)
cli 2.3.1 2021-02-23 [1] CRAN (R 4.0.3)
digest 0.6.27 2020-10-24 [1] CRAN (R 4.0.3)
evaluate 0.14 2019-05-28 [1] CRAN (R 4.1.0)
fs 1.5.0 2020-07-31 [1] CRAN (R 4.0.3)
glue 1.4.2 2020-08-27 [1] CRAN (R 4.1.0)
htmltools 0.5.1.1 2021-01-22 [1] CRAN (R 4.1.0)
knitr 1.31 2021-01-27 [1] CRAN (R 4.1.0)
magrittr 2.0.1 2020-11-17 [1] CRAN (R 4.0.3)
rlang 0.4.10 2020-12-30 [1] CRAN (R 4.0.3)
rmarkdown 2.6 2020-12-14 [1] CRAN (R 4.0.3)
sessioninfo 1.1.1 2018-11-05 [1] CRAN (R 4.0.3)
stringi 1.5.3 2020-09-09 [1] CRAN (R 4.0.3)
stringr 1.4.0 2019-02-10 [1] CRAN (R 4.0.3)
withr 2.4.1 2021-01-26 [1] CRAN (R 4.1.0)
xfun 0.21 2021-02-10 [1] CRAN (R 4.1.0)
yaml 2.2.1 2020-02-01 [1] CRAN (R 4.0.3)
[1] C:/Users/Jimmy Briggs/.R/lib/4.0
[2] C:/Program Files/R/R-4.0.3/library
To get all CTVs:
library(ctv)
cdir <- system.file("ctv", package = "ctv")
ctvs <- list.files(cdir, pattern = "\\.ctv$")
rr <- sapply(ctvs,
function(ctv) {
cat(sprintf("%25s ", ctv))
R <- read.ctv(file.path(cdir, ctv))
cat("\n")
R
},
simplify = FALSE) Bayesian.ctv
ChemPhys.ctv
ClinicalTrials.ctv
Cluster.ctv
DifferentialEquations.ctv
Distributions.ctv
Econometrics.ctv
Environmetrics.ctv
ExperimentalDesign.ctv
ExtremeValue.ctv
Finance.ctv
FunctionalData.ctv
Genetics.ctv
gR.ctv
Graphics.ctv
HighPerformanceComputing.ctv
MachineLearning.ctv
MedicalImaging.ctv
MetaAnalysis.ctv
ModelDeployment.ctv
Multivariate.ctv
NaturalLanguageProcessing.ctv
NumericalMathematics.ctv
OfficialStatistics.ctv
Optimization.ctv
Pharmacokinetics.ctv
Phylogenetics.ctv
Psychometrics.ctv
ReproducibleResearch.ctv
Robust.ctv
SocialSciences.ctv
Spatial.ctv
SpatioTemporal.ctv
Survival.ctv
TimeSeries.ctv
WebTechnologies.ctv
and for more details, including the packages within the CTVs:
for (n in names(rr)) {
cat(n, " :\n", rep.int("=", nchar(n)), "\n", sep = '')
knitr::knit_print(rr[[n]])
cat("--------------------------------------------------------\n")
}Bayesian.ctv :
============
CRAN Task View
--------------
Name: Bayesian
Topic: Bayesian Inference
Maintainer: Jong Hee Park
Contact: jongheepark@snu.ac.kr
Version: 2018-04-13
Packages: abc, abn, AdMit, arm*, AtelieR, BaBooN, BACCO*, BaM, bamlss, BAS,
BayesDA, BayesFactor, bayesGARCH, bayesImageS, bayesm*, bayesmeta,
bayesmix, bayesQR, BayesSummaryStatLM, bayesSurv*, Bayesthresh,
BayesTree, BayesValidate, BayesVarSel, BayesX, BayHaz, BAYSTAR,
bbemkr, BCBCSF, BCE, bclust, bcp, bisoreg, BLR, BMA, Bmix, BMS,
bnlearn, boa*, Bolstad, Boom, BoomSpikeSlab, bqtl, bridgesampling,
brms, bsamGP, bspec, bspmma, BSquare, bsts, BVS, catnet,
coalescentMCMC, coda*, cudaBayesreg, dclone, deal, deBInfer, dlm,
DPpackage*, EbayesThresh, ebdbNet, eco, eigenmodel, ensembleBMA,
evdbayes, exactLoglinTest, factorQR, FME, geoR, geoRglm, ggmcmc,
glmmBUGS, gRain, growcurves, hbsae, HI, Hmisc, iterLap,
LaplacesDemon, LearnBayes, lme4, lmm, MasterBayes, matchingMarkets,
mcmc*, MCMCglmm, MCMCpack*, mgcv, mlogitBMA, MNP, mombf, monomvn,
MSBVAR, NetworkChange, nimble*, openEBGM, pacbpred, PAWL,
predmixcor, PReMiuM, prevalence, profdpm, pscl, R2BayesX, R2jags,
R2WinBUGS, ramps, rbugs, revdbayes, RJaCGH, rjags, RSGHB, RSGHB,
rstan, rstiefel, runjags, Runuran, RxCEcolInf, SamplerCompare,
SampleSizeMeans, SampleSizeProportions, sbgcop, SimpleTable, sna,
spBayes, spikeslab, spikeSlabGAM, spTimer, stochvol, tgp,
tRophicPosition, zic
(* = core package)
--------------------------------------------------------
ChemPhys.ctv :
============
CRAN Task View
--------------
Name: ChemPhys
Topic: Chemometrics and Computational Physics
Maintainer: Katharine Mullen
Contact: katharine.mullen@stat.ucla.edu
Version: 2018-01-24
Packages: ALS*, AnalyzeFMRI, AquaEnv, astro, astrochron, astrodatR, astroFns,
astrolibR, Bchron, BioMark, bvls, celestial, CellularAutomaton,
chemCal*, chemometrics, ChemometricsWithR, ChemoSpec, CHNOSZ,
clustvarsel, compositions, cosmoFns, CosmoPhotoz, CRAC, dielectric,
diffractometry, drc, drm, EEM, elasticnet, enpls, fastICA, FITSio,
fmri, fpca, FTICRMS, homals, hyperSpec, investr, Iso*, kohonen*,
leaps, lira, lspls, MALDIquant, minpack.lm, moonsun, nlme, nlreg,
nnls*, OrgMassSpecR, pcaPP, Peaks, PET, planar, pls*, plspm, ppls,
prospectr, psy, PTAk*, quantchem, rcdk, rcdklibs, represent,
resemble, RobPer, rpubchem, sapa, SCEPtER, SCEPtERbinary, simecol,
snapshot, solaR, som, SPADAR, speaq, spls, stellaR, stepPlr,
subselect, TIMP, titan, titrationCurves, UPMASK, varSelRF, webchem,
WilcoxCV
(* = core package)
--------------------------------------------------------
ClinicalTrials.ctv :
==================
CRAN Task View
--------------
Name: ClinicalTrials
Topic: Clinical Trial Design, Monitoring, and Analysis
Maintainer: Ed Zhang and Harry G. Zhang
Contact: Ed.Zhang.jr@gmail.com
Version: 2018-03-26
Packages: adaptTest*, AGSDest, asd*, asypow, bcrm*, binomSamSize, blockrand*,
clinfun*, clinsig, clusterPower, coin, conf.design, CRM, CRTSize*,
dfcrm*, dfped, dfpk, DoseFinding, epibasix, ewoc, experiment*,
FrF2, GroupSeq*, gsbDesign, gsDesign*, HH, Hmisc*,
InformativeCensoring, ldbounds*, longpower, MChtest*, MCPMod,
Mediana, meta, metafor, metaLik, metasens, multcomp, nppbib, PIPS*,
PowerTOST*, pwr*, PwrGSD*, qtlDesign*, rmeta, samplesize, seqmon*,
speff2trial*, ssanv, survival*, TEQR*, ThreeArmedTrials,
ThreeGroups, TrialSize*
(* = core package)
--------------------------------------------------------
Cluster.ctv :
===========
CRAN Task View
--------------
Name: Cluster
Topic: Cluster Analysis & Finite Mixture Models
Maintainer: Friedrich Leisch and Bettina Gruen
Contact: Bettina.Gruen@jku.at
Version: 2018-05-04
Packages: AdMit, ADPclust, amap, apcluster, BayesLCA, bayesm, bayesmix,
bclust, bgmm, biclust, Bmix, bmixture, cba, cclust, CEC, CHsharp,
clue, cluster*, clusterfly, clusterGeneration, clusterRepro,
clusterSim, clustMixType, clustvarsel, clv, clValid, CoClust,
compHclust, dbscan, dendextend, depmix, depmixS4, dpmixsim,
dynamicTreeCut, e1071, edci, EMCluster, evclust, FactoClass,
fastcluster, fclust, flashClust, flexclust*, flexCWM, flexmix*,
fpc, FunCluster, funFEM, funHDDC, gamlss.mx, genie, GLDEX, GSM,
HDclassif, hybridHclust, idendr0, IMIFA, isopam, kernlab, kml,
largeVis, latentnet, LCAvarsel, lcmm, longclust, mcclust, mclust*,
MetabolAnalyze, mixAK, mixdist, mixPHM, mixRasch, mixreg, MixSim,
mixsmsn, mixtools, mixture, MOCCA, MoEClust, movMF, mritc, NbClust,
nor1mix, optpart, ORIClust, pdfCluster, pmclust, poLCA, prabclus,
prcr, PReMiuM, profdpm, protoclust, psychomix, pvclust, randomLCA,
rebmix, rjags, Rmixmod*, RPMM, seriation, sigclust, skmeans, som,
sparcl, tclust, teigen, treeClust, trimcluster, VarSelLCM, wle
(* = core package)
--------------------------------------------------------
DifferentialEquations.ctv :
=========================
CRAN Task View
--------------
Name: DifferentialEquations
Topic: Differential Equations
Maintainer: Karline Soetaert and Thomas Petzoldt
Contact: karline.soetaert@nioz.nl
Version: 2017-11-22
Packages: adaptivetau, bvpSolve*, cOde, CollocInfer, deSolve*, deTestSet,
dMod, ecolMod, FME, GillespieSSA, mkin, nlmeODE, odeintr,
PBSddesolve, PBSmodelling, phaseR, pomp, pracma, primer, QPot,
ReacTran, rODE, rodeo, rootSolve*, rpgm, scaRabee, sde*,
Sim.DiffProc, simecol
(* = core package)
--------------------------------------------------------
Distributions.ctv :
=================
CRAN Task View
--------------
Name: Distributions
Topic: Probability Distributions
Maintainer: Christophe Dutang, Patrice Kiener
Contact: Christophe.Dutang@ensimag.fr
Version: 2018-04-17
Packages: actuar*, AdMit, agricolae, ald, AtelieR, bayesm, benchden,
BiasedUrn, BivarP, bmixture, bridgedist, CDVine, cmvnorm, coga,
CompGLM, CompLognormal, compoisson, Compositional, Compounding,
CompQuadForm, condMVNorm, copBasic, copula*, csn, Davies,
degreenet, Delaporte, dirmult, disclap, DiscreteInverseWeibull,
DiscreteLaplace, DiscreteWeibull, distcrete, distr*, distrDoc,
distrEllipse, distrEx, DistributionUtils, distrMod, distrSim,
distrTeach, distrTEst, dng, e1071, ecd, emdbook, emg, EnvStats,
evd, evdbayes, evir, extraDistr, extremefit, FAdist, FatTailsR,
fBasics, fCopulae*, fExtremes, fgac, fitdistrplus, fitteR,
flexsurv, FMStable, fpow, frmqa, gambin, gamlss.dist*, gamlss.mx,
gaussDiff, gb, GB2, GenBinomApps, GeneralizedHyperbolic, GenOrd,
geoR, ghyp, GIGrvg, gld, GLDEX, glogis, GMD, GSM, gumbel, HAC,
hermite, HI, HistogramTools, hyper2, HyperbolicDist, ihs,
kernelboot, kolmim, KScorrect, LambertW, LaplacesDemon, LearnBayes,
lhs, LIHNPSD, lmom, lmomco*, Lmoments, logitnorm, loglognorm, marg,
MASS, mbbefd, mc2d, mclust, MCMCpack, mded, mgpd, minimax, MitISEM,
MittagLeffleR, MixedTS, mixtools, MM, mnormpow, mnormt*, modeest,
moments, movMF, msm, mvprpb, mvrtn, mvtnorm*, nCDunnett, Newdistns,
nor1mix, NormalGamma, NormalLaplace, normalp, ORDER2PARENT, OrdNor,
ParetoPosStable, PDQutils, PearsonDS*, PhaseType, poibin, poilog,
poistweedie, polyaAeppli, poweRlaw, qmap, QRM, randaes, random,
randtoolbox, RDieHarder, ReIns, reliaR*, Renext, retimes,
revdbayes, rlecuyer, RMKdiscrete, RMTstat, rngwell19937, rpgm,
rstream, RTDE, rtdists, Runuran, rust, s20x, sadists, SCI, setRNG,
sfsmisc, sgt, skellam, SkewHyperbolic, skewt, sld, smoothmest, SMR,
sn, sparseMVN, spd, stabledist, STAR, statmod, SuppDists,
symmoments, tmvtnorm, tolerance, trapezoid, triangle, truncnorm,
TSA, tsallisqexp, TTmoment, tweedie, VarianceGamma, VGAM*,
VineCopula, vines, zipfR
(* = core package)
--------------------------------------------------------
Econometrics.ctv :
================
CRAN Task View
--------------
Name: Econometrics
Topic: Econometrics
Maintainer: Achim Zeileis
Contact: Achim.Zeileis@R-project.org
Version: 2018-04-24
Packages: AER*, aod, apt, bayesm, betareg, BMA, BMS, boot, bootstrap, brglm,
CADFtest, car*, CDNmoney, censReg, clubSandwich, clusterSEs, crch,
decompr, dlsem, dynlm, Ecdat, effects, erer, expsmooth,
ExtremeBounds, fma, forecast*, frm, frontier, fxregime, gam,
gamlss, geepack, gets, glmx, gmm, gmnl, gvc, Hmisc, ineq, intReg,
ivbma, ivfixed, ivlewbel, ivpack, ivpanel, ivprobit, LARF, lavaan,
lfe, LinRegInteractive, lme4, lmtest*, margins, MASS,
matchingMarkets, Matrix, Mcomp, meboot, mfx, mgcv, mhurdle,
micEcon, micEconAids, micEconCES, micEconSNQP, midasr, mlogit,
mnlogit, MNP, MSBVAR, multiwayvcov, mvProbit, nlme, nnet, nonnest2,
np, ordinal, OrthoPanels, pampe, panelAR, Paneldata, panelvar,
PANICr, pco, pcse, pder, pdR, pglm, phtt, plm*, pscl, psidR, pwt,
pwt8, pwt9, quantreg, Rchoice, rdd, rddapp, rddtools, rdlocrand,
rdmulti, rdpower, rdrobust, reldist, REndo, rms, RSGHB,
rUnemploymentData, sampleSelection, sandwich*, segmented, sem,
SemiParSampleSel, semsfa, sfa, simpleboot, SparseM, spatialprobit,
spdep, spfrontier, sphet, splm, ssfa, strucchange, survival,
systemfit, truncreg, tsDyn, tseries*, tsfa, urca*, vars, VGAM,
wahc, wbstats, wooldridge, xts, Zelig, zoo*, zTree
(* = core package)
--------------------------------------------------------
Environmetrics.ctv :
==================
CRAN Task View
--------------
Name: Environmetrics
Topic: Analysis of Ecological and Environmental Data
Maintainer: Gavin Simpson
Contact: ucfagls@gmail.com
Version: 2018-04-11
Packages: ade4*, amap, analogue, aod, ape, aqp, BiodiversityR, boussinesq,
bReeze, CircStats, circular, cluster*, cocorresp, Distance,
diveMove, dse, dsm, DSpat, dyn, dynatopmodel, dynlm, e1071, earth,
eco, ecodist, EcoHydRology, EnvStats, equivalence, evd, evdbayes,
evir, extRemes, fast, FD, flexmix, forecast, fso, gam, gamair,
hydroGOF, HydroMe, hydroPSO, hydroTSM, Interpol.T, ipred, ismev,
labdsv*, latticeDensity, lme4, maptree, marked, MASS*, mclust, mda,
mefa, metacom, mgcv*, mrds, nlme, nsRFA, oce, openair, ouch, party,
pastecs, pgirmess, popbio, prabclus, primer, pscl, pvclust, qualV,
quantreg, quantregGrowth, randomForest, Rcapture, rioja, RMark,
RMAWGEN, rpart, rtop, seacarb, seas, secr, segmented, sensitivity,
simba, simecol, siplab, soiltexture, SPACECAP, SpatialExtremes,
StreamMetabolism, strucchange, surveillance, tiger, topmodel,
tseries, unmarked, untb, vegan*, vegetarian, VGAM, wasim, zoo
(* = core package)
--------------------------------------------------------
ExperimentalDesign.ctv :
======================
CRAN Task View
--------------
Name: ExperimentalDesign
Topic: Design of Experiments (DoE) & Analysis of Experimental Data
Maintainer: Ulrike Groemping
Contact: groemping@bht-berlin.de
Version: 2018-02-17
Packages: acebayes, agricolae*, agridat, AlgDesign*, ALTopt, asd,
BatchExperiments, BayesMAMS, bcrm, BHH2, binseqtest, bioOED,
blocksdesign, blockTools, BOIN, BsMD, choiceDes, CombinS,
conf.design*, crossdes*, Crossover, dae, daewr, designGG,
designGLMM, designmatch, desirability, desplot, dfcomb, dfcrm,
dfmta, dfpk, DiceDesign, DiceEval, DiceKriging, docopulae,
DoE.base*, DoE.MIParray, DoE.wrapper*, DoseFinding, dynaTree,
easypower, edesign, EngrExpt, experiment, ez, FMC, FrF2*,
FrF2.catlg128, GAD, geospt, granova, GroupSeq, gsbDesign, gsDesign,
gset, hiPOD, ibd, ICAOD, idefix, JMdesign, LDOD, lhs, MAMS, MaxPro,
MBHdesign, minimalRSD, minimaxdesign, mixexp, mkssd, mxkssd, OBsMD,
odr, OPDOE, optbdmaeAT, optDesignSlopeInt, OptGS, OptimalDesign,
OptimaRegion, OptInterim, optrcdmaeAT, osDesign, PBIBD, PGM2,
ph2bayes, ph2bye, pid, pipe.design, plgp, PopED, powerAnalysis,
powerbydesign, powerGWASinteraction, PwrGSD, qtlDesign,
qualityTools, RcmdrPlugin.DoE, rodd, RPPairwiseDesign, rsm*,
rsurface, SensoMineR, seqDesign, sFFLHD, simrel, skpr*, SLHD,
soptdmaeA, sp23design, ssize.fdr, ssizeRNA, support.CEs, TEQR, tgp,
ThreeArmedTrials, toxtestD, unrepx, vdg, Vdgraph, VdgRsm, VNM
(* = core package)
--------------------------------------------------------
ExtremeValue.ctv :
================
CRAN Task View
--------------
Name: ExtremeValue
Topic: Extreme Value Analysis
Maintainer: Christophe Dutang, Kevin Jaunatre
Contact: Christophe.Dutang@ensimag.fr
Version: 2017-12-26
Packages: copula, evd*, evdbayes, evir*, evmix, extremefit, extRemes,
extremeStat, fExtremes, ismev, lmom, lmomco, lmomRFA, mev, POT,
QRM, ReIns, Renext, revdbayes, RTDE, SpatialExtremes, texmex,
threshr, VGAM
(* = core package)
--------------------------------------------------------
Finance.ctv :
===========
CRAN Task View
--------------
Name: Finance
Topic: Empirical Finance
Maintainer: Dirk Eddelbuettel
Contact: Dirk.Eddelbuettel@R-project.org
Version: 2018-05-02
Packages: actuar, AmericanCallOpt, backtest, bayesGARCH, BCC1997,
BenfordTests, betategarch, bizdays, BLModel, BurStFin, BurStMisc,
CADFtest, car, ccgarch, ChainLadder, copula, CreditMetrics,
credule, crp.CSFP, cvar, data.table, derivmkts, dlm, Dowd, dse,
DtD, dyn, dynlm, ESG, estudy2, factorstochvol, fame, fAssets*,
FatTailsR, fBasics*, fBonds*, fCopulae*, fExoticOptions*,
fExtremes*, fgac, fGarch*, fImport*, financial, FinancialMath,
FinAsym, finreportr, fmdates, fMultivar*, fNonlinear*, fOptions*,
forecast, fPortfolio*, fracdiff, fractal, FRAPO, fRegression*,
frmqa, fTrading*, GCPM, GetHFData, gets, GetTDData, GEVStableGarch,
ghyp, gmm, gogarch, GUIDE, highfrequency, IBrokers, InfoTrad,
lgarch, lifecontingencies, lmtest, longmemo, LSMonteCarlo,
maRketSim, markovchain, MarkowitzR, matchingMarkets, MSBVAR,
MSGARCH, mvtnorm, NetworkRiskMeasures, nlme, NMOF, obAnalytics,
OptHedging, OptionPricing, pa, parma, pbo, PerformanceAnalytics*,
pinbasic, portfolio, PortfolioEffectHFT, PortfolioOptim,
portfolioSim, PortRisk, quantmod, QuantTools, ragtop, Rbitcoin,
Rblpapi, Rcmdr, RcppQuantuccia, reinsureR, restimizeapi, Risk,
RiskPortfolios, riskSimul, RM2006, rmgarch, RND, rpatrec, rpgm,
RQuantLib, rugarch*, rwt, sandwich, sde, SharpeR, sharpeRratio,
Sim.DiffProc, SmithWilsonYieldCurve, stochvol, strucchange,
TAQMNGR, tawny, termstrc, TFX, tidyquant, timeDate*, timeSeries*,
timsac, tis, TSdbi, tsDyn, tseries*, tseriesChaos, tsfa, TTR, tvm,
urca*, vars, VarSwapPrice, vrtest, wavelets, waveslim, wavethresh,
XBRL, xts*, ycinterextra, YieldCurve, Zelig, zoo*
(* = core package)
--------------------------------------------------------
FunctionalData.ctv :
==================
CRAN Task View
--------------
Name: FunctionalData
Topic: Functional Data Analysis
Maintainer: Fabian Scheipl
Contact: fabian.scheipl@stat.uni-muenchen.de
Version: 2018-02-12
Packages: classiFunc, covsep, dbstats, ddalpha, denseFLMM, fda*, fda.usc*,
fdadensity, fdakma, fdapace*, fdaPDE, fdasrvf*, fdatest, FDboost*,
fdcov, fds, flars, fpca, freqdom, freqdom.fda, ftsa*, ftsspec,
Funclustering, funcy*, funData, funFEM, funHDDC, geofd, GPFDA,
growfunctions, pcdpca, rainbow, refund*, refund.shiny, refund.wave,
RFgroove, roahd, sparseFLMM, switchnpreg, warpMix
(* = core package)
--------------------------------------------------------
Genetics.ctv :
============
CRAN Task View
--------------
Name: Genetics
Topic: Statistical Genetics
Maintainer: Giovanni Montana
Contact: g.montana@imperial.ac.uk
Version: 2017-04-25
Packages: adegenet, ape, Biodem, bqtl, dlmap, gap*, GenABEL, genetics*,
hapassoc, haplo.ccs, haplo.stats*, HardyWeinberg, hierfstat, hwde,
ibdreg, LDheatmap, luca, ouch, pbatR, phangorn, qtl, rmetasim,
seqinr, snp.plotter, SNPmaxsel, stepwise, tdthap, untb, wgaim
(* = core package)
--------------------------------------------------------
gR.ctv :
======
CRAN Task View
--------------
Name: gR
Topic: gRaphical Models in R
Maintainer: Soren Hojsgaard
Contact: sorenh@math.aau.dk
Version: 2018-01-06
Packages: abn, bayesmix, BDgraph, bnlearn, bnstruct, boa, BRugs, catnet,
coda, dclone, deal, diagram, DiagrammeR, dynamicGraph, ergm,
FBFsearch, GeneNet, ggm, giRaph, gRain, gRbase*, gRc, gRim, huge,
igraph, lvnet, mathgraph, MXM, ndtv, network, networkDynamic,
parcor, pcalg, QUIC, R2OpenBUGS, R2WinBUGS, rbugs, rjags, SIN
(* = core package)
--------------------------------------------------------
Graphics.ctv :
============
CRAN Task View
--------------
Name: Graphics
Topic: Graphic Displays & Dynamic Graphics & Graphic Devices & Visualization
Maintainer: Nicholas Lewin-Koh
Contact: nikko@hailmail.net
Version: 2015-01-07
Packages: ade4, animation, ape, aplpack, ash, biclust, Cairo, cairoDevice,
cba, colorspace, diagram, dichromat, gclus, ggplot2*, gplots,
gridBase, hexbin, IDPmisc, igraph, iplots, JavaGD, klaR, lattice*,
latticeExtra, misc3d, onion, playwith, plotrix*, RColorBrewer*,
rggobi, rgl*, RGraphics, RGtk2, RSvgDevice, RSVGTipsDevice,
scagnostics, scatterplot3d, seriation, tkrplot, vcd*, vioplot,
xgobi
(* = core package)
--------------------------------------------------------
HighPerformanceComputing.ctv :
============================
CRAN Task View
--------------
Name: HighPerformanceComputing
Topic: High-Performance and Parallel Computing with R
Maintainer: Dirk Eddelbuettel
Contact: Dirk.Eddelbuettel@R-project.org
Version: 2018-05-07
Packages: aprof, batch, BatchExperiments, BatchJobs, batchtools, bayesm, bcp,
BDgraph, biglars, biglm, bigmemory, bnlearn, caret, clustermq,
cudaBayesreg, data.table, dclone, doFuture, doMC, doMPI, doRedis,
doRNG, doSNOW, drake, ff, ffbase, flowr, foreach, future,
future.BatchJobs, GAMBoost, gcbd, gpuR, GUIProfiler, h2o,
HadoopStreaming, harvestr, HistogramTools, inline, keras, LaF,
latentnet, lga, Matching, MonetDB.R, nws, OpenCL, orloca, parSim,
partDSA, pbapply, pbdBASE, pbdDEMO, pbdDMAT, pbdMPI, pbdNCDF4,
pbdPROF, pbdSLAP, peperr, permGPU, pls, pmclust, profr, proftools,
pvclust, randomForestSRC, Rborist, Rcpp, RcppParallel, Rdsm,
reticulate, rgenoud, Rhpc, RhpcBLASctl, RInside, rJava, rlecuyer,
Rmpi*, RProtoBuf, rredis, rslurm, Sim.DiffProc, sitmo, snow*,
snowfall, snowFT, speedglm, sqldf, ssgraph, STAR, tensorflow,
tfestimators, tm, toaster, varSelRF, xgboost
(* = core package)
--------------------------------------------------------
MachineLearning.ctv :
===================
CRAN Task View
--------------
Name: MachineLearning
Topic: Machine Learning & Statistical Learning
Maintainer: Torsten Hothorn
Contact: Torsten.Hothorn@R-project.org
Version: 2018-04-27
Packages: ahaz, arules, BART, bartMachine, BayesTree, biglasso, bigRR, bmrm,
Boruta, bst, C50, caret, CORElearn, CoxBoost, Cubist, deepnet,
e1071*, earth, effects, elasticnet, ElemStatLearn, evclass, evtree,
FCNN4R, frbs, GAMBoost, gamboostLSS, gbm*, ggRandomForests, glmnet,
glmpath, GMMBoost, gradDescent, grf, grplasso, grpreg, h2o, hda,
hdi, hdm, ICEbox, ipred, kernlab*, klaR, lars, lasso2, LiblineaR,
LogicForest, LogicReg, LTRCtrees, maptree, mboost*, mlr, model4you,
MXM, ncvreg, nnet*, oem, OneR, opusminer, pamr, party, partykit,
pdp, penalized, penalizedLDA, penalizedSVM, plotmo, quantregForest,
randomForest*, randomForestSRC, ranger, rattle, Rborist, RcppDL,
rda, rdetools, REEMtree, relaxo, rgenoud, RLT, Rmalschains, rminer,
rnn, ROCR, RoughSets, rpart*, RPMM, RSNNS, RWeka, RXshrink, sda,
SIS, spa, stabs, SuperLearner, svmpath, tensorflow, tgp, tree,
trtf, varSelRF, vcrpart, wsrf, xgboost
(* = core package)
--------------------------------------------------------
MedicalImaging.ctv :
==================
CRAN Task View
--------------
Name: MedicalImaging
Topic: Medical Image Analysis
Maintainer: Brandon Whitcher
Contact: bwhitcher@gmail.com
Version: 2018-01-24
Packages: adaptsmoFMRI, adimpro*, AnalyzeFMRI*, arf3DS4*, bayesImageS,
bayesm, brainR, brainwaver, cudaBayesreg, DATforDCEMRI*, dcemriS4*,
divest*, dpmixsim*, dti*, edfReader*, eegkit*, fmri*, fslr,
gdimap*, mmand*, Morpho*, mritc*, neuroim*, neuRosim*, occ*,
oro.dicom*, oro.nifti*, PET, PTAk, RNifti*, RNiftyReg*, Rvcg*,
tractor.base*, waveslim
(* = core package)
--------------------------------------------------------
MetaAnalysis.ctv :
================
CRAN Task View
--------------
Name: MetaAnalysis
Topic: Meta-Analysis
Maintainer: Michael Dewey
Contact: lists@dewey.myzen.co.uk
Version: 2018-05-10
Packages: aggregation, altmeta, bamdit, bayesmeta, bmeta, bspmma, CAMAN,
CIAAWconsensus, clubSandwich, compute.es, ConfoundedMeta,
CopulaREMADA, CPBayes, CRTSize, diagmeta, dosresmeta, ecoreg,
effsize, epiR, esc, etma, exactmeta, extfunnel, forestmodel,
forestplot, gap, gemtc, getmstatistic, gmeta, hetmeta, ipdmeta,
joineRmeta, joint.Cox, MAc, MAd, mada, MAVIS,
MendelianRandomization, meta*, meta4diag, MetaAnalyser, MetABEL,
metaBMA, metacart, metacor, metafor*, metaforest, metafuse,
metagear, metagen, metagen, MetaIntegrator, metaLik, metaMA,
metamisc, metansue, metap, MetaPath, MetaPCA, metaplotr, metaplus,
MetaQC, metaRNASeq, metaSEM, metasens, MetaSKAT, metatest,
Metatron, metavcov, metaviz, mmeta, MultiMeta, mvmeta, mvtmeta,
netmeta, nmaINLA, nmathresh, pcnetmeta, pimeta, psychmeta,
psychometric, PubBias, RandMeta, ratesci, RBesT, RcmdrPlugin.EZR,
RcmdrPlugin.RMTCJags, revtools, rma.exact, rmeta, robumeta,
SAMURAI, SCMA, selectMeta, seqMeta, surrosurv, TFisher, weightr,
xmeta
(* = core package)
--------------------------------------------------------
ModelDeployment.ctv :
===================
CRAN Task View
--------------
Name: ModelDeployment
Topic: Model Deployment with R
Maintainer: Yuan Tang
Contact: terrytangyuan@gmail.com
Version: 2018-05-01
Packages: arules, arulesCBA, arulesSequences, aurelius, AzureML, dbplyr,
domino, dplyr, FastRWeb, h2o, httpuv, ibmdbR, jug, keras, mleap,
onnx, opencpu, plumber, pmml, pmmlTransformations, rattle,
reticulate, RSclient, Rserve, rsparkling, sparklyr, tensorflow,
tfestimators, tidypredict, xgboost, yhatr
--------------------------------------------------------
Multivariate.ctv :
================
CRAN Task View
--------------
Name: Multivariate
Topic: Multivariate Statistics
Maintainer: Paul Hewson
Contact: Paul.Hewson@plymouth.ac.uk
Version: 2018-02-12
Packages: abind, ade4*, amap, aplpack, ash, bayesm, ca, calibrate, car,
caret, class, clue, cluster*, clusterGeneration, clusterSim,
clustvarsel, clv, cocorresp, concor, copula, corpcor, covRobust,
cramer, cwhmisc, delt, denpro, desirability, dr, e1071, earth,
ellipse, energy, eRm, FactoMineR, fastICA, feature, fgac, fpc, fso,
gclus, GenKern, geometry, geozoo, gmodels, GPArotation, hddplot,
Hmisc, homals, hybridHclust, ICS, ICSNP, iplots, JADE, kernlab,
KernSmooth, kknn, klaR, knncat, kohonen, ks, lattice, ltm, mAr,
MASS*, Matrix, matrixcalc, mclust, MCMCpack, mda, mice, misc3d,
mitools, mix, mnormt, MNP, monomvn, mvnmle, mvnormtest, mvoutlier,
mvtnorm, nFactors, pan, paran, party, pcaPP, PearsonICA, pls,
plsgenomics, poLCA, polycor, ppls, prim, proxy, psy, PTAk, rda,
relaimpo, rggobi, rgl, robustbase, ROCR, rpart, rrcov,
scatterplot3d, sem, SensoMineR, seriation, simba, smatr, sn, spam,
SparseM, SpatialNP, superpc, trimcluster, tsfa, vcd, vegan*, VGAM,
VIM, xgobi, YaleToolkit
(* = core package)
--------------------------------------------------------
NaturalLanguageProcessing.ctv :
=============================
CRAN Task View
--------------
Name: NaturalLanguageProcessing
Topic: Natural Language Processing
Maintainer: Fridolin Wild, Performance Augmentation Lab (PAL, Department of Computing and Communications Technologies, Oxford Brookes University, UK
Contact: wild@brookes.ac.uk
Version: 2017-11-29
Packages: alineR, boilerpipeR, corpora, gsubfn, gutenbergr, hunspell,
kernlab, KoNLP, koRpus, languageR, lda, lsa, maxent, monkeylearn,
movMF, mscstexta4r, mscsweblm4r, openNLP, ore, phonics, phonics,
qdap, quanteda, RcmdrPlugin.temis, rel, RKEA, RTextTools, RWeka,
skmeans, SnowballC, stm, stringdist, stringi, tau, tesseract,
text2vec, textcat, textir, textrank, textreuse, tidytext, tm*,
tm.plugin.alceste, tm.plugin.dc, tm.plugin.europresse,
tm.plugin.factiva, tm.plugin.lexisnexis, tm.plugin.mail,
tm.plugin.webmining, tokenizers, topicmodels, udpipe, wordcloud,
wordnet, zipfR
(* = core package)
--------------------------------------------------------
NumericalMathematics.ctv :
========================
CRAN Task View
--------------
Name: NumericalMathematics
Topic: Numerical Mathematics
Maintainer: Hans W. Borchers
Contact: hwb@mailbox.org
Version: 2018-04-26
Packages: ADPF, akima, appell, arrangements, BB, Bessel, bigIntegerAlgos,
Brobdingnag, combinat, conicfit, contfrac, cubature, Deriv*,
eigeninv, elliptic, expint, expm, fastGHQuad, feather, features,
findpython, FixedPoint, fourierin, gaussquad, geigen, gmp, gsl,
hypergeo, interp, irlba, JuliaCall, ktsolve, lamW, logOfGamma,
magic, MASS, matlab, Matrix*, matrixcalc, MonoPoly, mpoly,
multipol, mvQuad, nleqslv, numbers, numDeriv*, onion, optR,
orthopolynom, Pade, partitions, permutations, polyCub, polynom*,
PolynomF, pracma*, PRIMME, PythonInR, QZ, R.matlab, R2Cuba,
rARPACK, Rcpp, RcppAlgos, RcppArmadillo, RcppEigen, reticulate,
Rlinsolve, Rmpfr, rmumps, RootsExtremaInflections, rPython, Rserve,
RSpectra, rSymPy, Ryacas, schumaker, signal, SimplicialCubature,
SnakeCharmR, SolveLS, SparseGrid, SparseM, SphericalCubature, ssvd,
statmod, stinepack, svd, tripack, VeryLargeIntegers, XR, XRJulia,
XRPython, Zseq
(* = core package)
--------------------------------------------------------
OfficialStatistics.ctv :
======================
CRAN Task View
--------------
Name: OfficialStatistics
Topic: Official Statistics & Survey Methodology
Maintainer: Matthias Templ
Contact: matthias.templ@gmail.com
Version: 2018-04-20
Packages: acs, Amelia, BalancedSampling, BIFIEsurvey, CalibrateSSB, cat,
cbsodataR, censusapi, CoImp, convey, deducorrect, DHS.rates,
easySdcTable, editrules, errorlocate, eurostat, extremevalues, FFD,
foreign, Frames2, GeomComb, gridsample, haven, hbsae, Hmisc, IC2,
icarus, inegiR, ineq, JoSAE, laeken, lavaan, lavaan.survey, lme4,
mapStats, MatchIt, MBHdesign, memisc, mi, mice, micEconIndex,
MicSim, MImix, mipfp, missForest, missMDA, mitools, mix, nlme,
norm, OECD, pan, panelaggregation, pps, PracTools, prevR, pxR,
quantification, questionr, RcmdrPlugin.sampling, RecordLinkage,
reweight, Rilostat, robCompositions, rpms, rrcov3way, rrcovNA,
RRTCS, rsae, rspa, rworldmap, saeSim, samplesize4surveys, sampling,
samplingbook, SamplingStrata, samplingVarEst, SAScii, SDaA,
sdcMicro, sdcTable, seasonal, SeleMix, simFrame, simPop,
simputation, sms, sorvi, spsurvey, srvyr, StatMatch,
stratification, stringdist, survey*, surveybootstrap, surveydata,
surveyoutliers, surveyplanning, svyPVpack, synthpop, tabplot,
TeachingSampling, tmap, treemap, univOutl, validate, validatetools,
vardpoor, VIM, x12, x12GUI, XBRL, yaImpute
(* = core package)
--------------------------------------------------------
Optimization.ctv :
================
CRAN Task View
--------------
Name: Optimization
Topic: Optimization and Mathematical Programming
Maintainer: Stefan Theussl
and Hans W. Borchers
Contact: R-optimization@mailbox.org
Version: 2018-05-07
Packages: ABCoptim, adagio, alabama*, BB, boot, bvls, cccp, cec2005benchmark,
cec2013, CEoptim, clpAPI, CLSOCP, clue, cmaes, cmaesr, colf,
coneproj, copulaedas, cplexAPI, crs, CVXR, dclone, DEoptim*,
DEoptimR, desirability, dfoptim*, Dykstra, ECOSolveR, ecr, flacco,
GA, genalg, GenSA, globalOptTests, glpkAPI, goalprog,
GrassmannOptim, gsl, hydroPSO, igraph, irace, isotone, kernlab,
kofnGA, lbfgs, lbfgsb3, limSolve, linprog, localsolver, LowRankQP,
lpSolve, lpSolveAPI, lsei, ManifoldOptim, matchingMarkets,
matchingR, maxLik, mcga, mco, metaheuristicOpt, minpack.lm, minqa,
mize, mknapsack, mlrMBO, n1qn1, neldermead, NlcOptim, nleqslv,
nlmrt, nloptr, nls2, nlsr, NMOF, nnls, ompr, onls, optimr,
optimsimplex, optimx, optmatch, parma, powell, pso, psoptim, qap,
quadprog*, quadprogXT, quantreg, rcdd, RCEIM, Rcgmin, rCMA, Rcplex,
RcppDE, RcppNumerical, Rcsdp, Rdsdp, rgenoud, Rglpk, rLindo,
Rmalschains, Rmosek, rneos, ROI, ROI.plugin.qpoases, rosqp, Rsolnp,
Rsymphony, Rtnmin, Rvmmin, SACOBRA, scs, sdpt3r, smoof, sna, soma,
subplex, tabuSearch, trust, trustOptim, TSP, ucminf*
(* = core package)
--------------------------------------------------------
Pharmacokinetics.ctv :
====================
CRAN Task View
--------------
Name: Pharmacokinetics
Topic: Analysis of Pharmacokinetic Data
Maintainer: Bill Denney
Contact: wdenney@humanpredictions.com
Version: 2018-05-04
Packages: cpk, dfpk, mrgsolve, ncar, nmw, NonCompart, PK, PKgraph,
PKPDmodels, pkr, PKreport, RxODE, scaRabee
--------------------------------------------------------
Phylogenetics.ctv :
=================
CRAN Task View
--------------
Name: Phylogenetics
Topic: Phylogenetics, Especially Comparative Methods
Maintainer: Brian O'Meara
Contact: omeara.brian@gmail.com
Version: 2018-02-21
Packages: adephylo, adhoc, ape*, apTreeshape, BAMMtools, bayou, betapart,
BioGeoBEARS, caper, cati, convevol, corHMM, DAMOCLES, DDD,
dendextend, distory, diversitree, evobiR, expands, expoTree,
geiger, geomorph, ggplot2, GUniFrac, HMPTrees, HyPhy, idendr0, ips,
iteRates, jaatha, kdetrees, markophylo, MCMCglmm, metafor, MPSEM,
mvMORPH, nLTT, ouch, outbreaker, OutbreakTools, OUwie, paleotree,
paleoTS, pastis, PBD, PCPS, pegas, phangorn, phyclust, phyext2,
phylobase, phylocanvas, phyloclim, PHYLOGR, phyloland, phylolm,
phylotools, phyloTop, phytools, pmc, RADami, rdryad, rmetasim,
rncl, RNeXML, rotl, rphast, Rphylip, SigTree, strap, surface,
SYNCSA, taxize, TESS, treebase, TreePar, treeplyr, TreeSim, vegan
(* = core package)
--------------------------------------------------------
Psychometrics.ctv :
=================
CRAN Task View
--------------
Name: Psychometrics
Topic: Psychometric Models and Methods
Maintainer: Patrick Mair
Contact: mair@fas.harvard.edu
Version: 2018-02-28
Packages: ade4*, anacor*, AnalyzeFMRI, aspect, BayesFM, BayesLCA, betareg,
BigSEM, BiplotGUI, birtr, blavaan*, bpca, BradleyTerry2, BTLLasso,
ca*, cabootcrs, cacIRT, catR, CAvariants, CDM, cds, cIRT, classify,
ClustVarLV, CMC, cncaGUI, cocor, cocorresp, cocron, CopyDetect,
covLCA, ctsem, CTT*, CTTShiny, DAKS, dexter, DFIT, DIFlasso,
difNLR, difR, DistatisR, dualScale, e1071, eba, ecodist, edstan,
eegkit, EFAutilities, elasticnet, emIRT, equate, equateIRT, eRm*,
esaBcv, EstCRM, ExPosition, FactoMineR, faoutlier, fastICA,
fechner, flexmix, fourPNO, fwdmsa, GDINA, GPArotation, gSEM,
gtheory, homals*, ica, ICC, immer, influence.SEM, irr, irtDemo,
irtoys, IRTpp, irtProb, irtrees, IRTShiny, kcirt, kequate,
KernSmoothIRT, kst, labdsv, latdiag, lava, lava.tobit, lavaan*,
lavaan.survey, lba, LCAvarsel, lcda, lme4*, LNIRT, lordif, lsl,
ltbayes, ltm*, LVMMCOR, MASS, MBESS, MCAvariants, mcIRT, MCMCglmm,
MCMCpack, medflex, mediation, metaSEM, MIIVsem, mirt*, mirtCAT,
missMDA, mixRasch, MLCIRTwithin, MLCM, MLDS, modelfree, mokken*,
MplusAutomation, mpt, MPTinR, mRm, MultiLCIRT, multiplex, multiway,
munfold, nFactors, nlme, nlsem, nsprcomp, OpenMx, optiscale,
ordinal, pairwise, paran, pathmox, pcaPP, pcIRT, piecewiseSEM, pks,
PLmixed, plotSEMM, plRasch, pls, plspm, poLCA, polycor, PP,
prefmod*, profileR, pscl, psy*, psych*, psychometric, psychomix,
psychotools, psychotree*, psyphy, PTAk, pwrRasch, qgraph,
QuantPsyc, quickpsy, randomLCA, RaschSampler, regsem, REQS, rpf,
rsem, sem*, semdiag, semGOF, SEMID, SEMModComp, semPlot, semPLS,
semTools, semtree, SensoMineR, ShinyItemAnalysis, Sim.DiffProc,
simsem, sirt, smacof*, smds, SNSequate, soc.ca, SOD,
SparseFactorAnalysis, sparseSEM, subscore, superMDS, systemfit,
TAM*, TestDataImputation, TestScorer, ThreeWay, TripleR, vegan*,
VGAM, wCorr, WrightMap, xgobi, xxIRT
(* = core package)
--------------------------------------------------------
ReproducibleResearch.ctv :
========================
CRAN Task View
--------------
Name: ReproducibleResearch
Topic: Reproducible Research
Maintainer: Max Kuhn
Contact: mxkuhn@gmail.com
Version: 2018-04-18
Packages: animation, apaStyle, apsrtable, archivist, ascii, bibtex, brew,
checkpoint, DT, exams, formatR, formattable, highlight, highr,
Hmisc*, htmlTable, htmltools, HTMLUtils, humanFormat, hwriter,
kfigr, knitcitations, knitLatex, knitr*, latex2exp, lazyWeave,
lubridate, markdown, memisc, miniCRAN, NMOF, packrat, pander,
papeR, prettyunits, quantreg, R.cache, R.rsp, R2HTML*, R2PPT, R2wd,
rapport, rbundler, RefManageR, ReporteRs, reporttools, resumer,
rmarkdown, rms*, rprintf, rtf, SortableHTMLTables, sparktex,
stargazer, suRtex, SweaveListingUtils, tables, TeachingSampling,
texreg, tikzDevice, tth, tufterhandout, xtable*, ztable
(* = core package)
--------------------------------------------------------
Robust.ctv :
==========
CRAN Task View
--------------
Name: Robust
Topic: Robust Statistical Methods
Maintainer: Martin Maechler
Contact: Martin.Maechler@R-project.org
Version: 2016-08-29
Packages: covRobust, coxrobust, distr, drgee, FRB, georob, GSE, lqmm, MASS*,
mblm, multinomRob, mvoutlier, OutlierDC, OutlierDM, quantreg,
RandVar, rgam, roahd, RobAStBase, robcor, robeth, robfilter,
RobLox, RobLoxBioC, RobPer, RobRex, RobRSVD, robumeta, robust*,
RobustAFT, robustbase*, robustDA, robustgam, robustlmm,
robustloggamma, robustreg, robustX, ROptEst, ROptRegTS, rorutadis,
rrcov*, rrcovHD, rrcovNA, rsig, RSKC, sandwich, ssmrob, TEEReg,
wle, WRS2
(* = core package)
--------------------------------------------------------
SocialSciences.ctv :
==================
CRAN Task View
--------------
Name: SocialSciences
Topic: Statistics for the Social Sciences
Maintainer: John Fox
Contact: jfox@mcmaster.ca
Version: 2018-05-08
Packages: acepack, Amelia, aod, arm, betareg, biglm, BMA, boot*, bootstrap,
brglm, car*, catspec, class, demography, dispmod, dr, effects*,
elrm, ergm, exactLoglinTest, gam*, gee, geepack, gmodels, gnm, gss,
Hmisc*, influence.ME, latentnet, leaps, lme4*, lmeSplines, lmm,
lmtest*, locfit, logistf, logmult, lsmeans*, MASS*, Matching,
MatchIt, MCMCglmm*, mgcv*, mi*, mice*, mitools, mix, mlogit, MNP,
multcomp*, multgee, multinomRob, multiplex, mvnmle, network, nlme*,
nlstools, nnet*, norm, np, optmatch, PAFit, pan, perturb,
PSAgraphics, pscl, quantreg*, qvcalc, rms*, RSiena, sandwich*,
simpleboot, sm, sna, spatial, statnet, survey*, survival*, vcd,
VGAM*, VIM, visreg, Zelig
(* = core package)
--------------------------------------------------------
Spatial.ctv :
===========
CRAN Task View
--------------
Name: Spatial
Topic: Analysis of Spatial Data
Maintainer: Roger Bivand
Contact: Roger.Bivand@nhh.no
Version: 2018-04-11
Packages: ade4, adehabitatHR, adehabitatHS, adehabitatLT, adehabitatMA, ads,
akima, AMOEBA, ash, aspace, automap, CARBayes, cartography,
classInt*, cleangeo, CompRandFld, constrainedKriging, cshapes,
dbmss, DCluster*, deldir*, diseasemapping, DSpat, ecespa,
ExceedanceTools, fields, FieldSim, FRK, gdalUtils, gdistance, gear,
geoaxe, geojson, geojsonio, GEOmap, geomapdata, geonames, geoR*,
geoRglm, georob, geospacom, geosphere, geospt, geostatsp, ggmap,
ggsn, glmmBUGS, gmt, Grid2Polygons, GriegSmith, gstat*, Guerry,
GWmodel, gwrr, hdeco, HSAR, igraph, intamap, ipdw, landsat,
latticeDensity, lawn, lctools, leafletR, magclass, mapdata,
mapmisc, mapproj, maps, maptools*, mapview, marmap, MBA, McSpatial,
micromap, ModelMap, ncdf4, ncf, ngspatial, nlme, OasisR,
OpenStreetMap, osmar, pastecs, PBSmapping, PBSmodelling,
plotGoogleMaps, plotKML, postGIStools, PReMiuM, ProbitSpatial,
quickmapr, ramps, RandomFields*, rangeMapper, RArcInfo, raster*,
rasterVis, RColorBrewer*, recmap, regress, rgbif, rgdal*, rgeos*,
RgoogleMaps, rgrass7, RNetCDF, rpostgis, RPyGeo, RQGIS, RSAGA,
RSurvey, rtop, rworldmap, rworldxtra, S2sls, seg, sf*, sgeostat,
shapefiles, shp2graph, siplab, smacpod, smerc, sp*, spacetime*,
spacom, spaMM, spanel, sparr, spatgraphs, spatial, spatial.tools,
spatialCovariance, SpatialEpi, SpatialExtremes, SpatialPosition,
spatialprobit, spatialsegregation, SpatialTools, spatstat*,
spatsurv, spBayes, spBayesSurv, spcosa, spdep*, sperrorest,
spgrass6, spgwr, sphet, spind, splancs*, splm, spm, spmoran,
spsann, spselect, spsurvey, spTimer, SSN, starma, statebins, Stem,
stplanr, taRifx, tgp, tmap, trip, tripack, tripEstimation,
UScensus2000cdp, UScensus2000tract, vardiag, vec2dtransf, vegan,
Watersheds, wkb
(* = core package)
--------------------------------------------------------
SpatioTemporal.ctv :
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CRAN Task View
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Name: SpatioTemporal
Topic: Handling and Analyzing Spatio-Temporal Data
Maintainer: Edzer Pebesma
Contact: edzer.pebesma@uni-muenster.de
Version: 2018-04-20
Packages: adehabitatLT*, animalTrack, argosfilter, BayesianAnimalTracker,
BBMM, bcpa, CARBayesST, crawl, cshapes, ctmcmove, ctmm, diveMove,
fishmove, FLightR, gapfill, GeoLight, googleVis, gstat*, lgcp,
lme4, M3, mkde, move, moveHMM, mvtsplot, ncdf4, nlme, openair,
pastecs, pbdNCDF4, plm, plotKML, RandomFields*, raster*, rasterVis,
rgl, rmatio, RNetCDF, rsatscan, sf, sigloc, SimilarityMeasures,
smam, solaR, sp*, spacetime*, spate, SpatioTemporal, spatstat,
spBayes, sphet, splancs, splm, spTimer, stam, Stem, STMedianPolish,
stppResid, surveillance*, trackeR, TrackReconstruction, trip*,
tripEstimation, VTrack, wildlifeDI, xts*
(* = core package)
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Survival.ctv :
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CRAN Task View
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Name: Survival
Topic: Survival Analysis
Maintainer: Arthur Allignol and Aurelien Latouche
Contact: arthur.allignol@gmail.com
Version: 2018-05-04
Packages: AdapEnetClass, addhazard, AER, aftgee, ahaz, AHR, AIM, APtools,
asaur, asbio, aster, aster2, BaSTA, BayesPiecewiseICAR, bayesSurv,
BayHaz, BGPhazard, Biograph, BMA, bnnSurvival, boot, bpcp,
bshazard, bujar, casebase, censReg, CFC, clinfun, cmprsk*,
cmprskQR, coarseDataTools, coin, compareC, compeir, compound.Cox,
concreg, condGEE, condSURV, controlTest, CoxBoost, coxinterval,
coxme, coxphf, coxphw, CoxRidge, coxrobust, coxsei, CPE, CPHshape,
Cprob, CR, crrp, crrSC, crrstep, crskdiag, currentSurvival,
Cyclops, DAAG, dblcens, discSurv, DPpackage, DStree, DTDA,
dynamichazard, dynfrail, dynpred, dynsurv, eha*, ELYP, emplik,
emplik2, Epi, epiR, etm, exactRankTests, FamEvent, fastcox,
fastpseudo, FHtest, fitdistrplus, flexPM, flexrsurv, flexsurv,
frailtyEM, frailtyHL, frailtypack, frailtySurv, gamboostMSM,
gamlss.cens, gbm, gcerisk, gems, genSurv, glmnet, glmpath,
globalboosttest, glrt, gof, GORCure, gss, GSSE, gte, hdnom,
ICBayes, ICE, icenReg, ICGOR, icRSF, ICsurv, IDPSurvival, imputeYn,
InformativeCensoring, intccr, intercure, interval, invGauss,
ipdmeta, ipred, isoph, jackknifeKME, JM, JMbayes, joineR, joineRML,
joint.Cox, JointModel, JPSurv, kaps, km.ci, kmconfband, kmi,
KMsurv, landest, lava.tobit, lbiassurv, LearnBayes, LexisPlotR,
lmec, locfit, logconcens, LogicReg, LogrankA, logspline, lpc,
lsmeans, lss, LTRCtrees, MAMSE, maxstat, mboost, MCMCglmm,
MCMCpack, mets, mexhaz, mfp, miCoPTCM, MicSim, MIICD, mixAK,
mixPHM, MLEcens, MRsurv, msm, msmtools, msSurv, MST, mstate*,
muhaz*, multcomp, multipleNCC, mvna, NADA, NestedCohort, NPHMC,
NPMLEcmprsk, npsurv, OIsurv, OrdFacReg, OutlierDC, p3state.msm,
paf, pamr, parfm, parfm, party, pch, pec, penalized, PenCoxFrail,
penMSM, peperr, PermAlgo, PHeval, phmm, plac, polspline, popEpi,
powerSurvEpi, PReMiuM, prodlim, psbcGroup, pseudo, quantreg,
randomForestSRC, ranger, rankhazard, reda, relsurv, reReg, rhosp,
riskRegression, risksetROC, rms*, RobustAFT, ROCt, rpart, rsig,
rstpm2, saws, SemiCompRisks, SemiMarkov, SGL, simexaft, SimHaz,
simMSM, simPH, SimSCRPiecewise, simsurv, smcure, SMIR,
SmoothHazard, smoothHR, smoothSurv, SMPracticals, spatstat,
spatsurv, spBayesSurv, SSRMST, superpc, surv2sampleComp,
survAccuracyMeasures, survAUC, survC1, SurvCorr, survexp.fr,
survey, Survgini, survIDINRI, survival*, survivalMPL, survivalROC,
survJamda, SurvLong, survminer, survMisc, survPresmooth, SurvRank,
SurvRegCensCov, survRM2, survsim, survSNP, SvyNom, TBSSurvival,
tdROC, thregI, timereg*, timeROC, tlmec, TP.idm, TPmsm, tpr,
TraMineR, TransModel, tranSurv, TSHRC, uniah, uniCox, VGAM,
vitality, YPmodel
(* = core package)
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TimeSeries.ctv :
==============
CRAN Task View
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Name: TimeSeries
Topic: Time Series Analysis
Maintainer: Rob J Hyndman
Contact: Rob.Hyndman@monash.edu
Version: 2018-04-15
Packages: acp, AER, ArDec, arfima, astsa, autovarCore, BAYSTAR, bentcableAR,
BETS, bfast, bigtime, BigVAR, BNPTSclust, boot, BootPR, brainwaver,
bspec, bsts, CADFtest, carfima, carx, cents, changepoint, chron,
cointReg, CommonTrend, costat, cts, dataseries, dCovTS, depmix,
depmixS4, deseasonalize, dLagM, dlm, dlmodeler, dlnm, dse, dtw,
dtwclust, dygraphs, dyn, dynlm, dynr, earlywarnings, Ecdat, ecm,
ecp, EMD, ensembleBMA, EvalEst, events, expsmooth, factorstochvol,
fame, fanplot, FeedbackTS, fGarch, FGN, FitAR, FitARMA, fma,
fNonlinear, ForeCA, forecast*, ForecastComb, forecastHybrid,
forecTheta, fpp, fpp2, fracdiff, fractal, fractalrock, freqdom,
freqdom.fda, fts, ftsa, funtimes, GAS, gdpc, ggseas, glarma, GMDH,
gsarima, gtop, HarmonicRegression, hht, hts, hwwntest, imputeTS,
influxdbr, InspectChangepoint, itsmr, jmotif, KFAS, KFKSDS, kza,
locits, lomb, LPStimeSeries, LSTS, ltsa, lubridate, mafs, MAPA,
mAr, MAR1, mar1s, MARSS, mclcar, Mcomp, meboot, mFilter, mlVAR,
mondate, MSBVAR, MSwM, MTS, mtsdi, MultipleBubbles, multitaper,
mvcwt, nardl, nets, nlts, nnfor, nonlinearTseries, npst, odpc,
opera, orderedLasso, paleoTS, partsm, pastecs, PCA4TS, pcdpca, pdc,
pdfetch, pear, perARMA, pomp, portes, prophet, psd, PSF, ptw,
Quandl, quantspec, rbcb, rdatamarket, RGENERATE, Rlibeemd, rmaf,
RMAWGEN, robets, robfilter, robustarima, roll, RSEIS, Rssa, rts,
rucrdtw, rugarch, rwt, sae2, scoringRules, SDD, sde, seas, season,
seasonal, seasonalview, Sim.DiffProc, sleekts, smooth, sparsevar,
spectral, spectral.methods, spTimer, stlplus, stochvol, stR,
strucchange, stsm, stsm.class, surveillance, svars, sweep, Tcomp,
TED, tempdisagg, tframe, thief, tibbletime, Tides, tiger, timeDate,
TimeProjection, timesboot, timeSeries, timetk, timsac, tis, tpr,
trend, TSA, tsbugs, TSclust, tscount, TSdbi, tsdecomp, tsdisagg2,
TSdist, tsDyn, tseries*, tseriesChaos, tseriesEntropy, tsfa,
tsfknn, tsibble, tsintermittent, TSMining, tsModel, tsoutliers,
tsPI, TSrepr, TSstudio, TSTutorial, tswge, urca, uroot, VAR.etp,
vars, VARsignR, Wats, WaveletComp, wavelets, waveslim, wavethresh,
WeightedPortTest, wktmo, wmtsa, x12, x12GUI, x13binary, xts, yuima,
ZIM, zoo*, ZRA
(* = core package)
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WebTechnologies.ctv :
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CRAN Task View
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Name: WebTechnologies
Topic: Web Technologies and Services
Maintainer: Thomas Leeper, Scott Chamberlain, Patrick Mair, Karthik Ram, Christopher Gandrud
Contact: thosjleeper@gmail.com
Version: 2018-05-10
Packages: abbyyR, aRxiv, aws.signature, AzureML, backblazer, bigml,
bigrquery, boilerpipeR, boxr, captr, clarifai, curl, cymruservices,
d3Network, datamart, dataone, datarobot, ddeploy, discgolf,
downloader, dvn, europepmc, factualR, FastRWeb, fbRads, fiery,
fitbitScraper, GAR, genderizeR, geoparser, ggmap, ggvis, gistr,
git2r, gitlabr, gmailr, googleAnalyticsR, googleCloudStorageR,
googlesheets, googleVis, graphTweets, gsheet, gtrendsR, htmltab,
httpcache, httping, httpRequest, httpuv, httr*, imguR, instaR, jqr,
jSonarR, jsonlite*, jsonvalidate, jug, leafletR, livechatR,
longurl, lucr, magrittr, mailR, mime, mscstexta4r, mscsweblm4r,
MTurkR, oai, OAIHarvester, openadds, opencage, opencpu, osi, osmar,
osmplotr, osrm, pdftables, placement, plotGoogleMaps, plotKML,
plumber, plusser, pubmed.mineR, pushoverr, RAdwords, randNames,
rapport, Rbitcoin, rbitcoinchartsapi, Rblpapi, RCurl*, RDataCanvas,
rdatacite, redcapAPI, RefManageR, repmis, request, restimizeapi,
Rexperigen, Rfacebook, rfigshare, RForcecom, RGA, rgeolocate,
RGoogleFit, RgoogleMaps, rio, rjson, RJSONIO, rLTP, RMixpanel,
ROAuth, Rook, ROpenFIGI, ROpenWeatherMap, rorcid, rosetteApi,
rplos, RPushbullet, rrefine, RSclient, rsdmx, Rserve,
RSiteCatalyst, RSmartlyIO, RStripe, rvest, RYandexTranslate,
RZabbix, scholar, scrapeR, searchConsoleR, sendmailR, servr,
shiny*, shopifyr, slackr, SocialMediaMineR, soql, streamR,
telegram, threewords, tm.plugin.webmining, transcribeR, translate,
translateR, tumblR, tweet2r, twitteR, uaparserjs, urlshorteneR,
urltools, V8, W3CMarkupValidator, webreadr, webshot, webutils,
whisker, WikidataR, wikipediatrend, WikipediR, WikiSocio, WufooR,
XML*, xml2, XML2R, yhatr, yummlyr, zendeskR
(* = core package)
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