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If a sample doesn't contain any trimmable reads, the file remains the same and the output is not emitted. This makes the pipeline fail. Make the output optional if it fails so the workflow can continue by reverting the next step to use the original fastq file
Command used and terminal output
No response
Relevant files
No response
System information
No response
The text was updated successfully, but these errors were encountered:
Description of the bug
If a sample doesn't contain any trimmable reads, the file remains the same and the output is not emitted. This makes the pipeline fail. Make the output optional if it fails so the workflow can continue by reverting the next step to use the original fastq file
Command used and terminal output
No response
Relevant files
No response
System information
No response
The text was updated successfully, but these errors were encountered: