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documentation updates and drop progress suggests (closes #86) #154

documentation updates and drop progress suggests (closes #86)

documentation updates and drop progress suggests (closes #86) #154

on:
push:
branches:
- main
- master
pull_request:
branches:
- main
- master
name: test-coverage
jobs:
test-coverage:
runs-on: windows-latest
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
steps:
- uses: actions/checkout@v3
- uses: r-lib/actions/setup-r@v2
- uses: r-lib/actions/setup-pandoc@v2
- name: Query dependencies
run: |
install.packages('remotes')
saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2)
writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version")
shell: Rscript {0}
- name: Cache R packages
uses: actions/cache@v3
with:
path: ${{ env.R_LIBS_USER }}
key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }}
restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-
- name: Install dependencies
run: |
install.packages(c("remotes"))
remotes::install_deps(dependencies = TRUE, upgrade = "always")
remotes::install_cran("covr")
shell: Rscript {0}
- name: Set API key
env:
OPENTOPO_KEY: ${{ secrets.OPENTOPO }}
run: |
cat(paste0("OPENTOPO_KEY=", Sys.getenv("OPENTOPO_KEY"), "\n"), file = paste0(normalizePath("~/"), "/.Renviron"), append = TRUE)
shell: Rscript {0}
- name: Test coverage
run: covr::codecov()
shell: Rscript {0}