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jdtuck · Feb 14, 2023 · e885a80 · e885a80
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diff --git a/CHANGES.txt b/CHANGES.txt
@@ -1,3 +1,4 @@
+v2.4.0,  2023-02-13 -- add of kmeans, image warping, and bugfixes
 v2.3.12,  2022-10-24 -- bugfixes
 v2.3.11,  2022-07-07 -- bugfixes
 v2.3.10,  2022-03-28 -- bugfixes

diff --git a/README.md b/README.md
@@ -17,7 +17,7 @@ using functional component analysis and regression.
 
 ### Installation
 ------------------------------------------------------------------------------
-v2.3.12 is on pip and can be installed using
+v2.4.0 is on pip and can be installed using
 > `pip install fdasrsf`
 
 or conda

diff --git a/doc/build/html/.buildinfo b/doc/build/html/.buildinfo
@@ -1,4 +1,4 @@
 # Sphinx build info version 1
 # This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
-config: dc1efd332c826847d7c9c24146785cda
+config: c71da3fc82755d99e630c2ce3740746b
 tags: 645f666f9bcd5a90fca523b33c5a78b7
diff --git a/doc/build/html/.doctrees/environment.pickle b/doc/build/html/.doctrees/environment.pickle
diff --git a/doc/build/html/_modules/index.html b/doc/build/html/_modules/index.html
@@ -8,7 +8,7 @@
 
   <meta name="viewport" content="width=device-width, initial-scale=1.0">
 
-  <title>Overview: module code &mdash; fdasrsf 2.3.12 documentation</title>
+  <title>Overview: module code &mdash; fdasrsf 2.4.0 documentation</title>
 
 
 
@@ -62,7 +62,7 @@
 
 
               <div class="version">
-                2.2
+                2.4
               </div>
 
 
@@ -191,7 +191,7 @@ <h1>All modules for which code is available</h1>
 
   <div role="contentinfo">
     <p>
-        &copy; Copyright 2022, J. Derek Tucker
+        &copy; Copyright 2023, J. Derek Tucker
 
     </p>
   </div>

diff --git a/doc/build/html/_static/documentation_options.js b/doc/build/html/_static/documentation_options.js
@@ -1,6 +1,6 @@
 var DOCUMENTATION_OPTIONS = {
     URL_ROOT: document.getElementById("documentation_options").getAttribute('data-url_root'),
-    VERSION: '2.3.12',
+    VERSION: '2.4.0',
     LANGUAGE: 'en',
     COLLAPSE_INDEX: false,
     BUILDER: 'html',

diff --git a/doc/build/html/boxplots.html b/doc/build/html/boxplots.html
@@ -9,7 +9,7 @@
 
   <meta name="viewport" content="width=device-width, initial-scale=1.0">
 
-  <title>Elastic Functional Boxplots &mdash; fdasrsf 2.3.12 documentation</title>
+  <title>Elastic Functional Boxplots &mdash; fdasrsf 2.4.0 documentation</title>
 
 
 
@@ -65,7 +65,7 @@
 
 
               <div class="version">
-                2.2
+                2.4
               </div>
 
 
@@ -101,6 +101,13 @@
 <li class="toctree-l1"><a class="reference internal" href="pcr_regression.html">Elastic Principal Component Regression</a></li>
 <li class="toctree-l1"><a class="reference internal" href="elastic_glm_regression.html">Elastic GLM Regression</a></li>
 <li class="toctree-l1"><a class="reference internal" href="tolerance.html">Elastic Functional Tolerance Bounds</a></li>
+<li class="toctree-l1"><a class="reference internal" href="kmeans.html">Elastic Functional Clustering</a></li>
+<li class="toctree-l1"><a class="reference internal" href="image.html">Elastic Image Warping</a></li>
+<li class="toctree-l1"><a class="reference internal" href="curve_statistics.html">Curve Registration</a></li>
+<li class="toctree-l1"><a class="reference internal" href="geodesic.html">SRVF Geodesic Computation</a></li>
+<li class="toctree-l1"><a class="reference internal" href="utility_functions.html">Utility Functions</a></li>
+<li class="toctree-l1"><a class="reference internal" href="curve_functions.html">Curve Functions</a></li>
+<li class="toctree-l1"><a class="reference internal" href="umap_metric.html">UMAP EFDA Metrics</a></li>
 </ul>
 
 
@@ -316,7 +323,7 @@
 
   <div role="contentinfo">
     <p>
-        &copy; Copyright 2022, J. Derek Tucker
+        &copy; Copyright 2023, J. Derek Tucker
 
     </p>
   </div>

diff --git a/doc/build/html/curve_functions.html b/doc/build/html/curve_functions.html
@@ -9,7 +9,7 @@
 
   <meta name="viewport" content="width=device-width, initial-scale=1.0">
 
-  <title>Curve Functions &mdash; fdasrsf 2.3.12 documentation</title>
+  <title>Curve Functions &mdash; fdasrsf 2.4.0 documentation</title>
 
 
 
@@ -39,7 +39,9 @@
   <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
   <link rel="stylesheet" href="_static/css/theme.css" type="text/css" />
     <link rel="index" title="Index" href="genindex.html" />
-    <link rel="search" title="Search" href="search.html" /> 
+    <link rel="search" title="Search" href="search.html" />
+    <link rel="next" title="UMAP EFDA Metrics" href="umap_metric.html" />
+    <link rel="prev" title="Utility Functions" href="utility_functions.html" /> 
 </head>
 
 <body class="wy-body-for-nav">
@@ -63,7 +65,7 @@
 
 
               <div class="version">
-                2.2
+                2.4
               </div>
 
 
@@ -87,7 +89,7 @@
 
 
 
-              <ul>
+              <ul class="current">
 <li class="toctree-l1"><a class="reference internal" href="user_guide.html">User Guide</a></li>
 <li class="toctree-l1"><a class="reference internal" href="time_warping.html">Functional Alignment</a></li>
 <li class="toctree-l1"><a class="reference internal" href="fPCA.html">Functional Principal Component Analysis</a></li>
@@ -97,6 +99,13 @@
 <li class="toctree-l1"><a class="reference internal" href="pcr_regression.html">Elastic Principal Component Regression</a></li>
 <li class="toctree-l1"><a class="reference internal" href="elastic_glm_regression.html">Elastic GLM Regression</a></li>
 <li class="toctree-l1"><a class="reference internal" href="tolerance.html">Elastic Functional Tolerance Bounds</a></li>
+<li class="toctree-l1"><a class="reference internal" href="kmeans.html">Elastic Functional Clustering</a></li>
+<li class="toctree-l1"><a class="reference internal" href="image.html">Elastic Image Warping</a></li>
+<li class="toctree-l1"><a class="reference internal" href="curve_statistics.html">Curve Registration</a></li>
+<li class="toctree-l1"><a class="reference internal" href="geodesic.html">SRVF Geodesic Computation</a></li>
+<li class="toctree-l1"><a class="reference internal" href="utility_functions.html">Utility Functions</a></li>
+<li class="toctree-l1 current"><a class="current reference internal" href="#">Curve Functions</a></li>
+<li class="toctree-l1"><a class="reference internal" href="umap_metric.html">UMAP EFDA Metrics</a></li>
 </ul>
 
 
@@ -864,12 +873,21 @@
           </div>
           <footer>
 
+    <div class="rst-footer-buttons" role="navigation" aria-label="footer navigation">
+
+        <a href="umap_metric.html" class="btn btn-neutral float-right" title="UMAP EFDA Metrics" accesskey="n" rel="next">Next <span class="fa fa-arrow-circle-right"></span></a>
+
+
+        <a href="utility_functions.html" class="btn btn-neutral float-left" title="Utility Functions" accesskey="p" rel="prev"><span class="fa fa-arrow-circle-left"></span> Previous</a>
+
+    </div>
+
 
   <hr/>
 
   <div role="contentinfo">
     <p>
-        &copy; Copyright 2022, J. Derek Tucker
+        &copy; Copyright 2023, J. Derek Tucker
 
     </p>
   </div>

diff --git a/doc/build/html/curve_statistics.html b/doc/build/html/curve_statistics.html
@@ -9,7 +9,7 @@
 
   <meta name="viewport" content="width=device-width, initial-scale=1.0">
 
-  <title>Curve Registration &mdash; fdasrsf 2.3.12 documentation</title>
+  <title>Curve Registration &mdash; fdasrsf 2.4.0 documentation</title>
 
 
 
@@ -41,7 +41,9 @@
   <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
   <link rel="stylesheet" href="_static/css/theme.css" type="text/css" />
     <link rel="index" title="Index" href="genindex.html" />
-    <link rel="search" title="Search" href="search.html" /> 
+    <link rel="search" title="Search" href="search.html" />
+    <link rel="next" title="SRVF Geodesic Computation" href="geodesic.html" />
+    <link rel="prev" title="Elastic Image Warping" href="image.html" /> 
 </head>
 
 <body class="wy-body-for-nav">
@@ -65,7 +67,7 @@
 
 
               <div class="version">
-                2.2
+                2.4
               </div>
 
 
@@ -89,7 +91,7 @@
 
 
 
-              <ul>
+              <ul class="current">
 <li class="toctree-l1"><a class="reference internal" href="user_guide.html">User Guide</a></li>
 <li class="toctree-l1"><a class="reference internal" href="time_warping.html">Functional Alignment</a></li>
 <li class="toctree-l1"><a class="reference internal" href="fPCA.html">Functional Principal Component Analysis</a></li>
@@ -99,6 +101,13 @@
 <li class="toctree-l1"><a class="reference internal" href="pcr_regression.html">Elastic Principal Component Regression</a></li>
 <li class="toctree-l1"><a class="reference internal" href="elastic_glm_regression.html">Elastic GLM Regression</a></li>
 <li class="toctree-l1"><a class="reference internal" href="tolerance.html">Elastic Functional Tolerance Bounds</a></li>
+<li class="toctree-l1"><a class="reference internal" href="kmeans.html">Elastic Functional Clustering</a></li>
+<li class="toctree-l1"><a class="reference internal" href="image.html">Elastic Image Warping</a></li>
+<li class="toctree-l1 current"><a class="current reference internal" href="#">Curve Registration</a></li>
+<li class="toctree-l1"><a class="reference internal" href="geodesic.html">SRVF Geodesic Computation</a></li>
+<li class="toctree-l1"><a class="reference internal" href="utility_functions.html">Utility Functions</a></li>
+<li class="toctree-l1"><a class="reference internal" href="curve_functions.html">Curve Functions</a></li>
+<li class="toctree-l1"><a class="reference internal" href="umap_metric.html">UMAP EFDA Metrics</a></li>
 </ul>
 
 
@@ -345,12 +354,21 @@
           </div>
           <footer>
 
+    <div class="rst-footer-buttons" role="navigation" aria-label="footer navigation">
+
+        <a href="geodesic.html" class="btn btn-neutral float-right" title="SRVF Geodesic Computation" accesskey="n" rel="next">Next <span class="fa fa-arrow-circle-right"></span></a>
+
+
+        <a href="image.html" class="btn btn-neutral float-left" title="Elastic Image Warping" accesskey="p" rel="prev"><span class="fa fa-arrow-circle-left"></span> Previous</a>
+
+    </div>
+
 
   <hr/>
 
   <div role="contentinfo">
     <p>
-        &copy; Copyright 2022, J. Derek Tucker
+        &copy; Copyright 2023, J. Derek Tucker
 
     </p>
   </div>

diff --git a/doc/build/html/fPCA.html b/doc/build/html/fPCA.html
@@ -9,7 +9,7 @@
 
   <meta name="viewport" content="width=device-width, initial-scale=1.0">
 
-  <title>Functional Principal Component Analysis &mdash; fdasrsf 2.3.12 documentation</title>
+  <title>Functional Principal Component Analysis &mdash; fdasrsf 2.4.0 documentation</title>
 
 
 
@@ -65,7 +65,7 @@
 
 
               <div class="version">
-                2.2
+                2.4
               </div>
 
 
@@ -101,6 +101,13 @@
 <li class="toctree-l1"><a class="reference internal" href="pcr_regression.html">Elastic Principal Component Regression</a></li>
 <li class="toctree-l1"><a class="reference internal" href="elastic_glm_regression.html">Elastic GLM Regression</a></li>
 <li class="toctree-l1"><a class="reference internal" href="tolerance.html">Elastic Functional Tolerance Bounds</a></li>
+<li class="toctree-l1"><a class="reference internal" href="kmeans.html">Elastic Functional Clustering</a></li>
+<li class="toctree-l1"><a class="reference internal" href="image.html">Elastic Image Warping</a></li>
+<li class="toctree-l1"><a class="reference internal" href="curve_statistics.html">Curve Registration</a></li>
+<li class="toctree-l1"><a class="reference internal" href="geodesic.html">SRVF Geodesic Computation</a></li>
+<li class="toctree-l1"><a class="reference internal" href="utility_functions.html">Utility Functions</a></li>
+<li class="toctree-l1"><a class="reference internal" href="curve_functions.html">Curve Functions</a></li>
+<li class="toctree-l1"><a class="reference internal" href="umap_metric.html">UMAP EFDA Metrics</a></li>
 </ul>
 
 
@@ -419,7 +426,7 @@
 
   <div role="contentinfo">
     <p>
-        &copy; Copyright 2022, J. Derek Tucker
+        &copy; Copyright 2023, J. Derek Tucker
 
     </p>
   </div>

diff --git a/doc/build/html/fPLS.html b/doc/build/html/fPLS.html
@@ -9,7 +9,7 @@
 
   <meta name="viewport" content="width=device-width, initial-scale=1.0">
 
-  <title>Functional Principal Least Squares &mdash; fdasrsf 2.3.12 documentation</title>
+  <title>Functional Principal Least Squares &mdash; fdasrsf 2.4.0 documentation</title>
 
 
 
@@ -65,7 +65,7 @@
 
 
               <div class="version">
-                2.2
+                2.4
               </div>
 
 
@@ -99,6 +99,13 @@
 <li class="toctree-l1"><a class="reference internal" href="pcr_regression.html">Elastic Principal Component Regression</a></li>
 <li class="toctree-l1"><a class="reference internal" href="elastic_glm_regression.html">Elastic GLM Regression</a></li>
 <li class="toctree-l1"><a class="reference internal" href="tolerance.html">Elastic Functional Tolerance Bounds</a></li>
+<li class="toctree-l1"><a class="reference internal" href="kmeans.html">Elastic Functional Clustering</a></li>
+<li class="toctree-l1"><a class="reference internal" href="image.html">Elastic Image Warping</a></li>
+<li class="toctree-l1"><a class="reference internal" href="curve_statistics.html">Curve Registration</a></li>
+<li class="toctree-l1"><a class="reference internal" href="geodesic.html">SRVF Geodesic Computation</a></li>
+<li class="toctree-l1"><a class="reference internal" href="utility_functions.html">Utility Functions</a></li>
+<li class="toctree-l1"><a class="reference internal" href="curve_functions.html">Curve Functions</a></li>
+<li class="toctree-l1"><a class="reference internal" href="umap_metric.html">UMAP EFDA Metrics</a></li>
 </ul>
 
 
@@ -246,7 +253,7 @@
 
   <div role="contentinfo">
     <p>
-        &copy; Copyright 2022, J. Derek Tucker
+        &copy; Copyright 2023, J. Derek Tucker
 
     </p>
   </div>

diff --git a/doc/build/html/genindex.html b/doc/build/html/genindex.html
@@ -8,7 +8,7 @@
 
   <meta name="viewport" content="width=device-width, initial-scale=1.0">
 
-  <title>Index &mdash; fdasrsf 2.3.12 documentation</title>
+  <title>Index &mdash; fdasrsf 2.4.0 documentation</title>
 
 
 
@@ -62,7 +62,7 @@
 
 
               <div class="version">
-                2.2
+                2.4
               </div>
 
 
@@ -811,7 +811,7 @@ <h2 id="Z">Z</h2>
 
   <div role="contentinfo">
     <p>
-        &copy; Copyright 2022, J. Derek Tucker
+        &copy; Copyright 2023, J. Derek Tucker
 
     </p>
   </div>