Resources and other info
- Nextflow training
- Documentation available at https://www.nextflow.io/docs/latest/index.html
- Steps for RNA seq pipeline available at https://seqera.io/training/
- Datafiles for RNA Seq pipeline available at https://github.com/nextflow-io/nf-hack17-tutorial/tree/master/data/ggal
- Scripts have been modified and uploaded accordingly with the same names
- Docker : https://hub.docker.com/r/nextflow/rnaseq-nf
- Samlmon : https://combine-lab.github.io/salmon/
- FastQC : https://www.bioinformatics.babraham.ac.uk/projects/fastqc/
- Multiqc : https://multiqc.info/
- Results available as a multiqc report at https://ineelhere.github.io/bioinformatics/