mglex-cli

#!/usr/bin/env python3
# This file is subject to the terms and conditions of the GPLv3 (see file 'LICENSE' as part of this source code package)

u"""
This is the mglex command line interface which executes the sub-commands.

Usage:
  mglex-cli [--version] [--help] <command> [<args>...]

  -h, --help         Show this screen
  -v, --version      Show version

Here are the commands to run:
   train             Train a model (set maximum-likelihood parameters)
   classify          Calculate likelihood of data under a model
   buildmatrix       Construct a responsibility matrix for grouped data
   evaluate          Evaluate classifications using a reference (true) responsibility matrix
   significance      Give a null model log-likelihood distribution and calculate p-values for unseen data
   bincompare        Compare bins by likelihood values

See 'mglex-cli <command> --help' for more information on a specific command.
"""

import sys
import importlib
import mglex.cli

__author__ = "code@fungs.de"
from mglex import __version__

if __name__ == "__main__":
    from docopt import docopt
    arguments = docopt(__doc__, version=__version__, options_first=True)

    try:
        command = importlib.import_module(".".join(("mglex", "cli", arguments["<command>"])))
        command.main(arguments["<args>"])
    except ImportError:
        sys.stderr.write("Command '%s' does not exist.\n" % arguments["<command>"])