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fix: remove conda from template
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Smeds committed Jun 2, 2023
1 parent 9d8dc59 commit 93a909f
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1 change: 0 additions & 1 deletion hydra_genetics/pipeline-template/workflow/rules/common.smk
Expand Up @@ -124,7 +124,6 @@ def generate_copy_rules(output_spec):
f'@workflow.output("{output_file}")',
f'@workflow.log("logs/{rule_name}_{output_file.name}.log")',
f'@workflow.container("{copy_container}")',
'@workflow.conda("../envs/copy_results_files.yaml")',
f'@workflow.resources(time="{time}", threads={threads}, mem_mb="{mem_mb}", '
f'mem_per_cpu={mem_per_cpu}, partition="{partition}")',
f'@workflow.shellcmd("{copy_container}")',
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