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@haniffalab

Haniffa Lab

Based in the Newcastle University Biosciences Institute, we apply disruptive techniques to understand how the immune system develops and maintains health

Popular repositories

  1. FCA_liver FCA_liver Public

    All software used for “Decoding human fetal liver haematopoiesis” (Popescu, Botting, Stephenson et al., 2019).

    R 35 16

  2. scRNA-seq_analysis scRNA-seq_analysis Public

    Single cell RNA-seq analysis bundle

    R 27 10

  3. webatlas-pipeline webatlas-pipeline Public

    A data pipeline built in Nextflow to process spatial and single-cell experiment data for visualisation in WebAtlas

    Python 23 4

  4. FCA_bone_marrow FCA_bone_marrow Public

    This repository contains all analysis scripts used to explore single cell datasets for: Jardine and Webb et al., 2021, "Blood and immune development in human fetal bone marrow and in Down syndrome"…

    Jupyter Notebook 13 5

  5. Single-cell-RNAseq-data-analysis-bundle Single-cell-RNAseq-data-analysis-bundle Public

    R 12 9

  6. HCA_skin HCA_skin Public

    HCA data analysis

    Jupyter Notebook 11 3

Repositories

Showing 10 of 26 repositories

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