GitHub - hainm/notebook-pytraj

Source: trajectory and prmtop files are converted from dcd and psf files from http://www.ks.uiuc.edu/Training/Tutorials/ (Membrane Proteins Tutorial section)

Name		Name	Last commit message	Last commit date
Latest commit History 57 Commits
data		data
membrane		membrane
receipts		receipts
3pqr.ipynb		3pqr.ipynb
LICENSE.md		LICENSE.md
README.md		README.md
animation_link_to_mpl.ipynb		animation_link_to_mpl.ipynb
animation_with_plot.ipynb		animation_with_plot.ipynb
doc_website.png		doc_website.png
index.ipynb		index.ipynb
lysozyme.mdcrd		lysozyme.mdcrd
lysozyme.prmtop		lysozyme.prmtop
main-logo-jupyter.svg		main-logo-jupyter.svg
ngl.png		ngl.png
ngl_cpp4.png		ngl_cpp4.png
phenix2016.ipynb		phenix2016.ipynb
requirements.txt		requirements.txt
trajectory_doc.png		trajectory_doc.png
trajectory_view.ipynb		trajectory_view.ipynb
trpcage_view.ipynb		trpcage_view.ipynb
tz2.nc		tz2.nc
tz2.ortho.nc		tz2.ortho.nc
tz2.ortho.parm7		tz2.ortho.parm7
tz2.parm7		tz2.parm7
tz2.pdb		tz2.pdb

hainm/notebook-pytraj