FANDAS

ATTENTION

The publication of FANDAS refers to its original release available at https://github.com/siddarthnarasimhan/FANDAS_2.0.

The present code contains changes made to the original code base and might not reflect the description given in its original publication.

We are currently working on extending this live version with examples, detailed user documentation and explaination of each term used in the input file.

Introduction

Fast ANlysis of multidimensional NMR DAta Sets (FANDAS) is an analysis tool built on Python to predict peaks in multidimensional NMR experiments on proteins.

FANDAS accepts a variety of inputs, with the protein sequence being the only minimum required input. The output generated by FANDAS can be opened using the NMR visualization software SPARKY.

Installation

git clone https://github.com/haddocking/fandas.git
cd fandas
python setup.py install
fandas -h

Example

cd example
fandas input.toml

Citation

• Narasimhan, S., Mance, D., Pinto, C., Weingarth, M., Bonvin, A. M. J. J. & Baldus, M. Rapid Prediction of Multi-dimensional NMR Data Sets Using FANDAS. Methods in Molecular Biology 111–132 (2017). doi:10.1007/978-1-4939-7386-6_6