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Added missing impute_nan for WenAlloys and removed unnecessary wa…
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…rning (#937)
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gbrunin committed Apr 22, 2024
1 parent 83b5445 commit 19798db
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Showing 3 changed files with 2 additions and 4 deletions.
2 changes: 1 addition & 1 deletion matminer/featurizers/composition/alloy.py
Expand Up @@ -719,7 +719,7 @@ def featurize(self, comp):
atomic_fraction = self.compute_atomic_fraction(elements, comp)
yang_delta = self.yss.compute_delta(comp)
yang_omega = self.yss.compute_omega(comp)
ape = AtomicPackingEfficiency().compute_simultaneous_packing_efficiency(comp)[0]
ape = AtomicPackingEfficiency(impute_nan=self.impute_nan).compute_simultaneous_packing_efficiency(comp)[0]
radii_local_mismatch = self.compute_local_mismatch(miracle_radius_stats["array"], fractions)
radii_gamma = self.compute_gamma_radii(miracle_radius_stats)
S_config = self.compute_configuration_entropy(fractions)
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2 changes: 0 additions & 2 deletions matminer/featurizers/composition/composite.py
Expand Up @@ -55,8 +55,6 @@ class ElementProperty(BaseFeaturizer):

def __init__(self, data_source, features, stats, impute_nan=False):
self.impute_nan = impute_nan
if not self.impute_nan:
warnings.warn(f"{self.__class__.__name__}(impute_nan=False):\n" + IMPUTE_NAN_WARNING)
if data_source == "pymatgen":
self.data_source = PymatgenData(impute_nan=self.impute_nan)
elif data_source == "magpie":
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2 changes: 1 addition & 1 deletion matminer/featurizers/composition/packing.py
Expand Up @@ -82,7 +82,7 @@ def __init__(self, threshold=0.01, n_nearest=(1, 3, 5), max_types=6, impute_nan=
self.impute_nan = impute_nan
if not self.impute_nan:
warnings.warn(f"{self.__class__.__name__}(impute_nan=False):\n" + IMPUTE_NAN_WARNING)
self._data_source = MagpieData(impute_nan=impute_nan)
self._data_source = MagpieData(impute_nan=self.impute_nan)

# Lookup table of ideal radius ratios
self.ideal_ratio = dict(
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