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gih0004/README.md

Hi there 👋

My name is Guillian Hernández, a graduate student in Virginia Tech. The purpose of this account is to share tools from both my research and personal projects.

  • 🔭 I’m currently working on Potato physiology research, with a strong focus on trascriptomics. Additionaly, I will start to add repositories in this account from projects I have done for personal interest.

  • I’m looking to collaborate on small bioinformatics projects that may be related to the ones posted on this account. Mainly, intersted in helping others develop computational tools they can use for research.

  • 📫 How to reach me: gih0004@vt.edu

  • X: Guillian_HC

  • LinkedIn: https://www.linkedin.com/in/guillianhernandez/

Popular repositories

  1. RNA_salmon_to_visualization RNA_salmon_to_visualization Public

    Contains scripts used to generate Heatmaps for TPM expression for transcritps/loci of interest from filtered paired-end RNA reads

    R 2

  2. RNA_seq_pipeline RNA_seq_pipeline Public

    RNA seq pipeline designed for paired end reads using HTSEQ for producing files needed for visualizing transcriptomic data with DESEQ2

    Shell 1

  3. RNA_Seq_featurecounts RNA_Seq_featurecounts Public

    This repository contatins a pipeline for RNA-Seq data processing using featurecounts for gene count generation

    Shell

  4. gih0004 gih0004 Public

  5. Research_helpers Research_helpers Public

    This repository is to store different scripts that can be implemented for automating different experimental setups

    Python

  6. Identifying_Orthologues Identifying_Orthologues Public

    This repository is intented to provide an overview of integrating Orthofinder and Blastn for identifying orthologues between references genomes

    Shell