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Update allele switches messages
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seppinho committed Jan 30, 2024
1 parent f504dbf commit 491222b
Showing 1 changed file with 1 addition and 1 deletion.
Original file line number Diff line number Diff line change
Expand Up @@ -340,7 +340,7 @@ else if (task.getStrandFlipSimple() + task.getStrandFlipAndAlleleSwitch() > stra
// Check if too many allele switches are detected
else if (task.getAlleleSwitch() > alleleSwitches) {
text.append("<br><b>Error:</b> More than " + alleleSwitches
+ " allele switches have been detected. Imputation cannot be started!");
+ " allele switches have been detected. Instructions to solve this issue can be found in our documentation. Imputation cannot be started!");
context.error(text.toString());

return false;
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