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GENEMEDE

GENEMEDE (GEneric NEuro MEtadata DEscriptors) is a generic metadata framework that may be used to comprehensively describe a neuroscience experiment.

The tool and the website is still a work in progress, so please expect a lot of changes.

For more information on the project please refer to our Documentation

Installation

Make sure you have pipenv in your default python environment

pip install pipenv

Clone the repo and install using pipenv

git clone 
cd genemede
pipenv install --dev -e .

This will install the package in editable mode and the development dependencies

To activate the genemede environment, just type the following in the genemede main folder: pipenv shell (type exit or press Ctrl+D to deactivate).

Additionally, you can also install pipes to help with CLI pipenv environments: pip install pipenv-pipes

Make sure your Python IDE is using the correct environment