ipycondor

ipycondor provides IPython interfaces for HTCondor and its native python bindings. Users can submit, monitor and manage condor jobs with a graphical user interface (GUI) backed by ipywidgets. It also support the creation of a ipyparallel cluster as a condor job running on remote execute nodes with SSH tunneling for communication between ipython engines and the controller.

Install

With pip

$ pip install git+https://github.com/gdlmx/ipycondor.git

Manually

$ git clone https://github.com/gdlmx/ipycondor.git
$ cd ipycondor
$ python setup.py install

Configuration

The IPython configuration files are typically located in directory at ~/.ipython/profile_<name>, where <name> is the canonical name of the profile. The config files involved in the following steps should be found/created inside this directory.

IPython

To load the ipython magics %%CondorJob and %CondorMon at startup, insert the following line in the ipython config file ipython_config.py.

c.InteractiveShellApp.extensions = ['ipycondor.Condor']

IPCluster

To use the condor launcher for IPClusterEngines , the ipcluster profile should be manually configurated:

1. Insert the following line into ip_cluster_config.py

c.IPClusterEngines.engine_launcher_class = 'ipycondor.launcher.HTCondorEngineSetSshLauncher'
c.IPClusterStart.controller_launcher_class = 'Local'

2. Create a shell script and save it as "ipengine_launcher".

source /opt/conda/bin/activate base
exec "$@" 

This script will be used as the executable for the condor job to launch ipengines on the execute node, modify it according to the environments of your computer cluster.

Usage

Please refer to the example notebook in the subdirectory "examples".