Update FSL configuration for FSL >= 6.0.6 #1072
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…location is now $HOME/fsl/, and FSL executables are located in $FSLDIR/share/fsl/bin/
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(reported at #1071)
Howdy, this PR just updates the
$FSL_DIR/$FSL_BINconfiguration to work with newer (>= 6.0.6) FSL installations. For FSL >= 6.0.6:$HOME/fsl/rather than/usr/local/fsl/$FSLDIR/share/fsl/bin/- this is because$FSLDIRis now a conda environment, and so$FSLDIR/bin/contains unrelated executables (e.g.python3).$FSLDIR/share/fsl/bin/contains a set of "wrapper" scripts for all FSL executables, so can be added to the$PATHwithout it being polluted with non-FSL executables.Thanks!