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Flatiron Institute

Popular repositories

  1. CaImAn CaImAn Public

    Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.

    Python 603 358

  2. DeepFRI DeepFRI Public

    Deep functional residue identification

    Python 277 69

  3. CaImAn-MATLAB CaImAn-MATLAB Public

    Complete Matlab pipeline for large scale calcium imaging data analysis

    MATLAB 244 147

  4. finufft finufft Public

    Non-uniform fast Fourier transform library of types 1,2,3 in dimensions 1,2,3

    C++ 243 69

  5. NoRMCorre NoRMCorre Public

    Matlab routines for online non-rigid motion correction of calcium imaging data

    MATLAB 132 84

  6. deepblast deepblast Public

    Neural Networks for Protein Sequence Alignment

    Python 97 16

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