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postgresql database creation #98

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nhoffman opened this issue Jun 24, 2017 · 0 comments
Open

postgresql database creation #98

nhoffman opened this issue Jun 24, 2017 · 0 comments

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@nhoffman
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Looks like a postgresql database must first be created before new_database can be run:

./taxit -v new_database postgresql://localhost/ncbi_taxonomy
...
sqlalchemy.exc.OperationalError: (psycopg2.OperationalError) FATAL:  database "ncbi_taxonomy" does not exist

Is there a reason not to auto-create, or at least provide a flag to do so?
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@nhoffman