ICA toolbox GUI - DEPRECATED

This repository is out of date. If you want to use this toolbox, we strongly advise you to use MNELAB, which includes all the feature.

Description

The ICA toolbox GUI is a graphic interface designed to make easier the use of MNE Independent Component Analysis (ICA) capabilities .

Installation

Use the package manager pip to install required depencies:

pip install -r requirements.txt

Or build a docker image from the docker file:

docker build -t ica_toolbox .

Usage

Using Python

To launch the app using from your python installation use:

python run.py

Using docker

Linux

First you need to allow docker to access you screen/

sudo xhost +local:docker

Or use the docker image you created:

sudo docker run -ti --rm -e DISPLAY=$DISPLAY -v /tmp/.X11-unix:/tmp/.X11-unix icatoolbox

Use -v -v HOST_FOLDER/:/DOCKER_FOLDER to share a folder between the host and the docker image and therefore import / export files from the application.

sudo docker run -ti --rm -e DISPLAY=$DISPLAY -v /tmp/.X11-unix:/tmp/.X11-unix -v HOST_FOLDER/:/DOCKER_FOLDER icatoolbox

Windows

Natively, a Linux based docker image is not able to pop graphic interface on windows host. One solution is to install a third party software Xlaunch to cast GUI from docker to windows. After completing the installation , you must start Xlaunch and configure it. Select parameters that best suit you ( or keep default) and make sure to check Disable access control on the extra settings menu. Once done, you should be able to see the GUI by using the following command specified

docker run -e DISPLAY=MY_IP:0.0 icatoolbox

where MY_IP is your local IP ( use ipconfig on your command line to known your current ip )

Use -v -v HOST_FOLDER/:/DOCKER_FOLDER to share a folder between the host and the docker image and therefore import / export files from the application.

docker run -e DISPLAY=MY_IP:0.0 -v HOST_FOLDER/:/DOCKER_FOLDER icatoolbox

Contributing

Pull requests are welcome. For major changes, please open an issue first to discuss what you would like to change.

License

GNU Lesser General Public License v3.0