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25 Open 115 Closed
25 Open 115 Closed
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Issues list

Plotting with {epicontacts}
#255 opened May 20, 2024 by jamesmbaazam
Verify all images include helpful alt-text
#254 opened May 20, 2024 by jamesmbaazam
Release epichains 0.1.0
#247 opened May 16, 2024 by jamesmbaazam
6 of 24 tasks
v0.1.0
1
3
Add architecture diagram
#246 opened May 15, 2024 by jamesmbaazam
Make likelihood() an S3 generic
#244 opened May 9, 2024 by jamesmbaazam
Make chains stop at a hard limit using the stat_* argument
#243 opened May 8, 2024 by jamesmbaazam
Use checkmate naming conventions for internal input checkers
#222 opened Mar 13, 2024 by jamesmbaazam
Make likelihood() return a list of all options help wanted Extra attention is needed question Further information is requested
#207 opened Feb 8, 2024 by jamesmbaazam
2
Interpret offspring distribution as degree distribution
#204 opened Feb 6, 2024 by sbfnk
4
General improvements to COVID-19 data raw low-priority refactoring
#166 opened Dec 15, 2023 by jamesmbaazam v0.2.0
Code optimisation: prefer matrices over data.frames in loops optimisation
#148 opened Dec 14, 2023 by jamesmbaazam v0.2.0
Restructure applications literature vignette into themes documentation Improvements or additions to documentation
#139 opened Dec 13, 2023 by jamesmbaazam v0.2.0
Code optimisation: ensure output are actually stored as integers optimisation refactoring
#136 opened Dec 13, 2023 by jamesmbaazam v0.2.0
Make sure likelihood() returns one base type
#133 opened Dec 12, 2023 by jamesmbaazam v0.1.0
Add test to check closed forms of the likelihoods against approximations
#132 opened Dec 12, 2023 by jamesmbaazam
Make required arguments passed through ... explicit discussion help wanted Extra attention is needed
#125 opened Dec 12, 2023 by jamesmbaazam
Combine documentation of similar functions documentation Improvements or additions to documentation
#67 opened Sep 12, 2023 by jamesmbaazam v0.2.0
Consider implementing likelihood() as log_likelihood() and wrapping with logLik() discussion help wanted Extra attention is needed refactoring
#64 opened Sep 12, 2023 by jamesmbaazam
Refactor likelihood() function to use check_()functions refactoring
#49 opened Aug 31, 2023 by jamesmbaazam
Consider implementing epichains in line with generic modelling functions/packages in R discussion
#42 opened Aug 7, 2023 by jamesmbaazam
Allow likelihood() to deal with an epichains objects enhancement New feature or request
#39 opened Aug 1, 2023 by jamesmbaazam v0.1.0
1
Number of generations function enhancement New feature or request question Further information is requested
#36 opened Jun 9, 2023 by joshwlambert v0.2.0
3
Likelihood for multi-type clusters enhancement New feature or request
#15 opened Nov 24, 2022 by adamkucharski
1
Visualisation and post-onset outcome functionality enhancement New feature or request
#7 opened Nov 22, 2022 by adamkucharski
@jamesmbaazam
2
Joint estimation of R and k vignette-idea
#124 opened Nov 22, 2022 by adamkucharski v0.2.0
4
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