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Merge branch 'last-update' into 'dev'
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rename aws

See merge request epi2melabs/workflow-containers/wf-bacterial-genomes!24
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sarahjeeeze committed Mar 9, 2022
2 parents 76efe5f + ec01271 commit bd2c922
Showing 1 changed file with 3 additions and 3 deletions.
6 changes: 3 additions & 3 deletions nextflow.config
Original file line number Diff line number Diff line change
Expand Up @@ -58,7 +58,7 @@ profiles {
}
process {
withLabel:wfbacterialgenomes {
container = "ontresearch/wf-hap-snps:${params.wfversion}"
container = "ontresearch/wf-bacterial-genomes:${params.wfversion}"
}
}
process {
Expand All @@ -76,7 +76,7 @@ profiles {
}
process {
withLabel:wfbacterialgenomes {
container = "ontresearch/wf-hap-snps:${params.wfversion}"
container = "ontresearch/wf-bacterial-genomes:${params.wfversion}"
}
}
process {
Expand Down Expand Up @@ -114,7 +114,7 @@ profiles {
queue = "${params.aws_queue}"
memory = '8G'
withLabel:containerCPU {
container = "${params.aws_image_prefix}-wf-hap-snps:${params.wfversion}"
container = "${params.aws_image_prefix}-wf-bacterial-genomes:${params.wfversion}"
}
withLabel:prokka {
// TODO: fix this
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