2021 02 proteomes model changes

[dlrice]

Purpose

Reflect proteomes API model changes in the front end codebase

Approach

• Namespace: proteome → proteomes
• As directed by backend several proteomes attributes in the response are optional:
  • components
  • genomeAssembly
  • genomeAssemblyUrl
• Added level to GenomeAssembly type (which represents Genome representation)
• Rank enum added to taxonLineage and displayed in column renderer (more to be done for this and is covered in https://www.ebi.ac.uk/panda/jira/browse/TRM-25206)
• Converted mock data to TS (had to use a globally unique name for the file [bug] duplicate manual mock found in separate directories jestjs/jest#2070)
• Added top level redundantTo and isolate fields
• exclusionReasons excluded from mock data for the reason that excluded proteomes are not indexed. Leo pretty sure of this but will check with Katie to confirm and I will update if it turns this is not the case.
• Label change: Genome representation (RefSeq) → Genome representation

Testing

Update existing snapshots

Checklist

• My PR is scoped properly, and “does one thing only”
• I have reviewed my own code
• I have checked that linting checks pass and type safety is respected
• I have checked that tests pass and coverage has at least improved, and if not explained the reasons why

[aurel-l]

Just some linting changes (but eslint is not being run on files not yet covered by TS)