Space-time smoothing models for subnational measles routine immunization coverage estimation with complex survey data
Here are some example R code for the analyses and visualizations in "Space-time smoothing models for subnational measles routine immunization coverage estimation with complex survey data" by Dong and Wakefield (2021) (https://doi.org/10.1214/21-aoas1474).
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s1_data_clean.R: code for data cleaning.
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s2_get_dir_est.R: code for obtaining design-based direct estimates of overall vaccination coverage.
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s3_fit_model.R: code for fitting space-time smoothing models.
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s4_model_summ.R: code for plotting maps of posterior summary statistics of the model results.